RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 YBX3P16989 372 aaKnown RBP eCLIP8.47□□□□□ -1.05
SNX13-201ENST00000409076 MAGP20916 626 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 BDNFP23560 247 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 PTPN7P35236 360 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 PIK3CGP48736 1102 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 ECT2LQ008S8 904 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 MS4A2Q01362 244 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 TSTA3Q13630 321 aaPredicted RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 IL23RQ5VWK5 629 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 NCBP2-AS2Q69YL0 99 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 TSHZ1Q6ZSZ6 1077 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 OR6J1Q8NGC5 347 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 SPATA13Q96N96 652 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 MPHOSPH6Q99547 160 aaKnown RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 CCDC106Q9BWC9 280 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 SPATA16Q9BXB7 569 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 PRMT7Q9NVM4 692 aaPredicted RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 FAM50BQ9Y247 325 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 TMX2-CTNND1H3BSU7 103 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 CASQ2O14958 399 aaPredicted RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 AXIN1O15169 862 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 GFAPP14136 432 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 RPS6KA3P51812 740 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 CHN2P52757 468 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 NRG1Q02297 640 aaPredicted RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 MADCAM1Q13477 382 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 C11orf91Q3C1V1 193 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 MBLAC2Q68D91 279 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 RNF111Q6ZNA4 994 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 EFHBQ8N7U6 833 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 ENDOVQ8N8Q3 282 aaKnown RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 PSD4Q8NDX1 1056 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 OPTNQ96CV9 577 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 FAM167AQ96KS9 214 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 GMLQ99445 158 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 SERPINI1Q99574 410 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 Q9H521 79 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 PIGVQ9NUD9 493 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 EXD2Q9NVH0 621 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 ARHGEF38Q9NXL2 777 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 EMCNQ9ULC0 261 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 RBMX2Q9Y388 322 aaKnown RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 SHROOM3Q8TF72 1996 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 YJEFN3A6XGL0 299 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 CRTAMO95727 393 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 SERPINB9P50453 376 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 ZNF132P52740 706 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 SLC18A2Q05940 514 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 FAM83EQ2M2I3 478 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 ARMCX2Q7L311 632 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 FAM35AQ86V20 835 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 GALNT15Q8N3T1 639 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 NUDT8Q8WV74 236 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 SKA2Q8WVK7 121 aaPredicted RBP8.46□□□□□ -1.05
SNX13-201ENST00000409076 SENP6Q9GZR1 1112 aaPredicted RBP8.46□□□□□ -1.05
SNX13-201ENST00000409076 WDCPQ9H6R7 721 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 NT5MQ9NPB1 228 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.46□□□□□ -1.05
SNX13-201ENST00000409076 AFF4Q9UHB7 1163 aaKnown RBP8.46□□□□□ -1.05
SNX13-201ENST00000409076 NHSQ6T4R5 1651 aa8.46□□□□□ -1.05
SNX13-201ENST00000409076 HBP1O60381 514 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 SIX3O95343 332 aaPredicted RBP8.46□□□□□ -1.06
SNX13-201ENST00000409076 CYP2B6P20813 491 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 CRHR1P34998 444 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 SEMG2Q02383 582 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 FBXO47Q5MNV8 452 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 LPCAT2Q7L5N7 544 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 PIM3Q86V86 326 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 PQLC1Q8N2U9 271 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 FBXW8Q8N3Y1 598 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 ZNF276Q8N554 614 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 RDM1Q8NG50 284 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 GAD1Q99259 594 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 DDX43Q9NXZ2 648 aaKnown RBP8.46□□□□□ -1.06
SNX13-201ENST00000409076 EPS15L1Q9UBC2 864 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 PRG3Q9Y2Y8 225 aaPredicted RBP8.46□□□□□ -1.06
SNX13-201ENST00000409076 TIMM22Q9Y584 194 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 CDY2AQ9Y6F7 541 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 CDY1Q9Y6F8 540 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 MYO10Q9HD67 2058 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 INPP4BO15327 924 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 FESP07332 822 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 MTHFD1P11586 935 aaKnown RBP8.46□□□□□ -1.06
SNX13-201ENST00000409076 CPB1P15086 417 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 FDFT1P37268 417 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 STT3AP46977 705 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 GABRB2P47870 512 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 CDK7P50613 346 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 MSLNQ13421 630 aaPredicted RBP8.46□□□□□ -1.06
SNX13-201ENST00000409076 PDK2Q15119 407 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 C6orf10Q5SRN2 563 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 CELF3Q5SZQ8 465 aaKnown RBP8.46□□□□□ -1.06
SNX13-201ENST00000409076 RBM20Q5T481 1227 aaKnown RBP8.46□□□□□ -1.06
SNX13-201ENST00000409076 LRRC8BQ6P9F7 803 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 OLFML1Q6UWY5 402 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 ZBTB49Q6ZSB9 765 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 MFN1Q8IWA4 741 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 FAM47BQ8NA70 645 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms