RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 AARDQ4LEZ3 155 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF57Q68EA5 555 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCTD8Q6ZWB6 473 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 BPIFB6Q8NFQ5 453 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 IFI44Q8TCB0 444 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 MBD3L1Q8WWY6 194 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 DDX50Q9BQ39 737 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 PIMREGQ9BSJ6 248 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 POMKQ9H5K3 350 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 RXFP1Q9HBX9 757 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCNS2Q9ULS6 477 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 COQ6Q9Y2Z9 468 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 PCDHGA9Q9Y5G4 932 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 DNMT1P26358 1616 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 DFNA5O60443 496 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALDH1A2O94788 518 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 WEE2P0C1S8 567 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 TECP42680 631 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 CAPZA1P52907 286 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC34A1Q06495 639 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 NR6A1Q15406 480 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SPDYE7PQ495Y7 208 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 RPL13AP3Q6NVV1 102 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZBTB49Q6ZSB9 765 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 SV2BQ7L1I2 683 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 USP38Q8NB14 1042 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 MR1Q95460 341 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 PGAP3Q96FM1 320 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR51V1Q9H2C8 321 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAB20Q9NX57 234 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 CALML5Q9NZT1 146 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 ADAM28Q9UKQ2 775 aa6.15□□□□□ -1.43
CDC42BPA-201ENST00000334218 MROH5Q6ZUA9 1318 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANKRD33BA6NCL7 494 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PAPSS1O43252 624 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PLIN3O60664 434 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SCGB1D1O95968 90 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 M6PRP20645 277 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MUTP22033 750 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CFL1P23528 166 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 GRIA1P42261 906 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SCTRP47872 440 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 IREB2P48200 963 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRAMEP78395 509 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CBFBQ13951 182 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF598Q86UK7 904 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PDIK1LQ8N165 341 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 HDAC10Q969S8 669 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 VCPIP1Q96JH7 1222 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCNL2Q96S94 520 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 TBC1D10AQ9BXI6 508 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MEAF6Q9HAF1 191 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ABCA9Q8IUA7 1624 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SPDYE2BA6NHP3 402 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SPDYE6P0CI01 402 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 DLSTP36957 453 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PLTPP55058 493 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPP1R8Q12972 351 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 DRAP1Q14919 205 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MLC1Q15049 377 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 LRIT3Q3SXY7 679 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SPDYE2Q495Y8 402 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 BROXQ5VW32 411 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PAOXQ6QHF9 649 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMCO2Q7Z6W1 182 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF786Q8N393 782 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 FANCBQ8NB91 859 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR2L2Q8NH16 312 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SNX33Q8WV41 574 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTCD2Q8WV60 388 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 HEPHQ9BQS7 1158 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAGEF1Q9HAY2 307 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 VTA1Q9NP79 307 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTPRTO14522 1441 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 CHD2O14647 1828 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC22A2O15244 555 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 JUPP14923 745 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRKCIP41743 596 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PHKA2P46019 1235 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 METAP2P50579 478 aaKnown RBP eCLIP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SREBF2Q12772 1141 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 RFX4Q33E94 735 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 RNF212Q495C1 297 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 USP39Q53GS9 565 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SMARCD3Q6STE5 483 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM83HQ6ZRV2 1179 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 METTL16Q86W50 562 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 NT5DC4Q86YG4 428 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 KBTBD7Q8WVZ9 684 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC7A3Q8WY07 619 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 KLHL5Q96PQ7 755 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 ULBP1Q9BZM6 244 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 C1orf21Q9H246 121 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 AKIRIN1Q9H9L7 192 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 MKNK2Q9HBH9 465 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTPRMP28827 1452 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM135BQ49AJ0 1406 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 TYW5A2RUC4 315 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRRG1O14668 218 aa6.14□□□□□ -1.43
CDC42BPA-201ENST00000334218 SCAF4O95104 1147 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms