RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 A0A0A0MRY4 1105 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 M0R3G1 203 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 RNASEH1O60930 286 aaKnown RBP15.5■□□□□ 0.07
VARS2-201ENST00000321897 MTA2O94776 668 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 ME2P23368 584 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 ATN1P54259 1190 aaPredicted RBP15.5■□□□□ 0.07
VARS2-201ENST00000321897 NUP107P57740 925 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 LPIN1Q14693 890 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 OVOS1Q6IE37 1185 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 SCIMPQ6UWF3 145 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 ZNF554Q86TJ5 538 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 ADCK1Q86TW2 530 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 KCTD4Q8WVF5 259 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 SPATA13Q96N96 652 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 APOL5Q9BWW9 433 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 NIFKQ9BYG3 293 aaKnown RBP15.5■□□□□ 0.07
VARS2-201ENST00000321897 CYTH4Q9UIA0 394 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 GNEQ9Y223 722 aaKnown RBP15.5■□□□□ 0.07
VARS2-201ENST00000321897 ANGPT2O15123 496 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 SERPINE1P05121 402 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 HADHBP55084 474 aaKnown RBP15.5■□□□□ 0.07
VARS2-201ENST00000321897 ZNF460Q14592 562 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 RBBP7Q16576 425 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 SLC41A1Q8IVJ1 513 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 FBXW8Q8N3Y1 598 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 RCN3Q96D15 328 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 SIX4Q9UIU6 781 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 NT5C1B-RDH14C9J2C7 533 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 MGEA5O60502 916 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 PNPLA4P41247 253 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 PITX1P78337 314 aaPredicted RBP15.5■□□□□ 0.07
VARS2-201ENST00000321897 NADK2Q4G0N4 442 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 SFT2D3Q587I9 215 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 TEDDM1Q5T9Z0 273 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 ARMCX6Q7L4S7 300 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 TTC30AQ86WT1 665 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 C12orf50Q8NA57 414 aaPredicted RBP15.5■□□□□ 0.07
VARS2-201ENST00000321897 PANX3Q96QZ0 392 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 SEPHS2Q99611 448 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 BRD8Q9H0E9 1235 aa15.5■□□□□ 0.07
VARS2-201ENST00000321897 SLC12A8A0AV02 714 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 NPR3P17342 541 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 CDH13P55290 713 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 SOWAHAQ2M3V2 549 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 ASRGL1Q7L266 308 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 PLPPR4Q7Z2D5 763 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 SEC14L1Q92503 715 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 WNT8BQ93098 351 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 TUBGCP3Q96CW5 907 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 CDHR5Q9HBB8 845 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 LATS2Q9NRM7 1088 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 TRNAU1APQ9NX07 287 aaKnown RBP15.49■□□□□ 0.07
VARS2-201ENST00000321897 DCDC2Q9UHG0 476 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 TSPAN1O60635 241 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 MT-CYBP00156 380 aaPredicted RBP15.49■□□□□ 0.07
VARS2-201ENST00000321897 COX4I1P13073 169 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 DNAJB2P25686 324 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 GPR142Q7Z601 462 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 PNPLA1Q8N8W4 532 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 DCBLD1Q8N8Z6 715 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 ANKRD52Q8NB46 1076 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 CERS2Q96G23 380 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 PLEKHG4BQ96PX9 1271 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 PEBP4Q96S96 227 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 FAM50BQ9Y247 325 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 SMAPO00193 183 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 MAGEB3O15480 346 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 SRP72O76094 671 aaKnown RBP15.49■□□□□ 0.07
VARS2-201ENST00000321897 NR1H2P55055 460 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 ZRANB3Q5FWF4 1079 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 MFSD14CQ5VZR4 134 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 WDTC1Q8N5D0 677 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 SHCBP1Q8NEM2 672 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 AGAP2Q99490 1192 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 ADAM2Q99965 735 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 VPS33BQ9H267 617 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 NMRAL1Q9HBL8 299 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 POPDC2Q9HBU9 364 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 RSL24D1Q9UHA3 163 aaKnown RBP15.49■□□□□ 0.07
VARS2-201ENST00000321897 SH3GLB1Q9Y371 365 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 ORC6Q9Y5N6 252 aa15.49■□□□□ 0.07
VARS2-201ENST00000321897 C2CD4BA6NLJ0 364 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 ZNF839A8K0R7 811 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 FOXD2O60548 495 aaPredicted RBP15.48■□□□□ 0.07
VARS2-201ENST00000321897 NDUFS3O75489 264 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 DAB1O75553 588 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 HMOX2P30519 316 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 SYPL2Q5VXT5 272 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 SAPCD2Q86UD0 394 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 GIPC2Q8TF65 315 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 KCTD15Q96SI1 283 aaPredicted RBP15.48■□□□□ 0.07
VARS2-201ENST00000321897 CIB1Q99828 191 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 NOL6Q9H6R4 1146 aaKnown RBP15.48■□□□□ 0.07
VARS2-201ENST00000321897 CCDC88AQ3V6T2 1871 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 MYBPHLA2RUH7 354 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 CLOCKO15516 846 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 PSEN2P49810 448 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 CPT1AP50416 773 aa15.48■□□□□ 0.07
VARS2-201ENST00000321897 LSM3P62310 102 aaKnown RBP15.48■□□□□ 0.07
VARS2-201ENST00000321897 SIX1Q15475 284 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms