RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 KHSRPQ92945 711 aaKnown RBP eCLIP10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 BHMTQ93088 406 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 BTBD9Q96Q07 612 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 TMEM209Q96SK2 561 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 MAGEB5Q9BZ81 275 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 C20orf27Q9GZN8 174 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 NACA2Q9H009 215 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 TMEM30AQ9NV96 361 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 USP18Q9UMW8 372 aa10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 PRG3Q9Y2Y8 225 aaPredicted RBP10.53□□□□□ -0.72
APOBEC3F-201ENST00000308521 CDH23Q9H251 3354 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 FAM159BA6NKW6 160 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 AVILO75366 819 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 KITP10721 976 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 CCL5P13501 91 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 MSLNQ13421 630 aaPredicted RBP10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 UBAP2LQ14157 1087 aaKnown RBP10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 TCTN1Q2MV58 587 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 SFT2D3Q587I9 215 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 CLLU1OSQ5K130 101 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 DUS1LQ6P1R4 473 aaKnown RBP10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 TMEM53Q6P2H8 277 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 LRRC8DQ7L1W4 858 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 PIGZQ86VD9 579 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 CAND1Q86VP6 1230 aaKnown RBP10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 ACTRT2Q8TDY3 377 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 SLC4A5Q9BY07 1137 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 SLC13A1Q9BZW2 595 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 XAB2Q9HCS7 855 aaKnown RBP10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 NGRNQ9NPE2 291 aaKnown RBP10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 SMYD2Q9NRG4 433 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 ASNSD1Q9NWL6 643 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 THEGQ9P2T0 379 aa10.52□□□□□ -0.72
APOBEC3F-201ENST00000308521 RANBP2P49792 3224 aaKnown RBP10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 CCDC195A0A1B0GUA6 201 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 C9IYK1 514 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 MATN2O00339 956 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 VCLP18206 1134 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 S100A1P23297 94 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 WARSP23381 471 aaKnown RBP10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 MAGEA3P43357 314 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 BST2Q10589 180 aaKnown RBP10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 CCNIQ14094 377 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 ARHGAP17Q68EM7 881 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 CD300LGQ6UXG3 332 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 NPNTQ6UXI9 565 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 RNF111Q6ZNA4 994 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 CYS1Q717R9 158 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 SLC24A5Q71RS6 500 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 LIMS2Q7Z4I7 341 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 IQCF2Q8IXL9 164 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 FAM126BQ8IXS8 530 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 NDUFAF2Q8N183 169 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 PIWIL2Q8TC59 973 aaKnown RBP10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 ACMSDQ8TDX5 336 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 PGBD4Q96DM1 585 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 PCED1BQ96HM7 432 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 VPS50Q96JG6 964 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 TNIP3Q96KP6 325 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 PEBP4Q96S96 227 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 EBF4Q9BQW3 602 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 CALN1Q9BXU9 219 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 RGS18Q9NS28 235 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 GPATCH2LQ9NWQ4 482 aa10.52□□□□□ -0.73
APOBEC3F-201ENST00000308521 SYNJ2BP-COX16A0A087WUM0 186 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 BCLAF3A2AJT9 711 aaKnown RBP10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 ARHGAP42A6NI28 874 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 C2CD4BA6NLJ0 364 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 H7C0C1 242 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 GABRDO14764 452 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 RPLP2P05387 115 aaKnown RBP10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 PBX3P40426 434 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 ATP5OP48047 213 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 COPAP53621 1224 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 BCAT1P54687 386 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 NRLP54845 237 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 SLC6A3Q01959 620 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 ADIGQ0VDE8 80 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 STILQ15468 1287 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 CCDC14Q49A88 953 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 SYCP2LQ5T4T6 812 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 UNC5AQ6ZN44 842 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 DEFB128Q7Z7B8 93 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 CCDC33Q8N5R6 958 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 SLC25A41Q8N5S1 370 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 GSDMBQ8TAX9 411 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 KLC2Q9H0B6 622 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 INIPQ9NRY2 104 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 DNAJC28Q9NX36 388 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 SAGE1Q9NXZ1 904 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 COX16Q9P0S2 106 aa10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 SCHIP1Q9P0W5 487 aaPredicted RBP10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 MARCOQ9UEW3 520 aaPredicted RBP10.51□□□□□ -0.73
APOBEC3F-201ENST00000308521 ADAMTS6Q9UKP5 1117 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms