RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 NKAPQ8N5F7 415 aaKnown RBP17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 METTL6Q8TCB7 284 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 ATL1Q8WXF7 558 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 HEY2Q9UBP5 337 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 BLOC1S6Q9UL45 172 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 C1orf232A0A0U1RR37 186 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 MYO1CO00159 1063 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 CCL5P13501 91 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 SEC24CP53992 1094 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 ASB2Q96Q27 587 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 OPTCQ9UBM4 332 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 ALDH9A1P49189 494 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 SLC5A3P53794 718 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 ARHGAP1Q07960 439 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 HLA-DQA1Q5Y7H0 255 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 C2orf15Q8WU43 125 aaKnown RBP17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 UNKQ9C0B0 810 aaKnown RBP17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 KRCC1Q9NPI7 259 aaPredicted RBP17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 SAE1Q9UBE0 346 aaPredicted RBP17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 KELP23276 732 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 IRAK1P51617 712 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 LILRA4P59901 499 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 NFYCQ13952 458 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 VARS2Q5ST30 1063 aaKnown RBP17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 GPSM1Q86YR5 675 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 LRRC34Q8IZ02 419 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 SEMA4DQ92854 862 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 SCLYQ96I15 445 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 A0A087X1B8 175 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 EPHB6O15197 1021 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 SERPINE1P05121 402 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 PPP2R1BP30154 601 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 ADRA1BP35368 520 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 CDK7P50613 346 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 HSPA14Q0VDF9 509 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 DPY30Q9C005 99 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 ADNPQ9H2P0 1102 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 CDK18Q07002 472 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 CYLC2Q14093 348 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 PPP2R2DQ66LE6 453 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 NAT16Q8N8M0 369 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 NINJ2Q9NZG7 142 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 MRPS17Q9Y2R5 130 aaKnown RBP17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 GUCY1B2O75343 617 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 ACRP10323 421 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 ERFP50548 548 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 YIPF3Q9GZM5 350 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 STARD13Q9Y3M8 1113 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 CCT8L1PA6NM43 557 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 MEI4A8MW99 385 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 UBDO15205 165 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 ANXA5P08758 320 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 SERPINB5P36952 375 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 AQP5P55064 265 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 FUT11Q495W5 492 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 ATP13A4Q4VNC1 1196 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 PARP9Q8IXQ6 854 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 GMLQ99445 158 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 FZD8Q9H461 694 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 SH3BP4Q9P0V3 963 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 RPS6KB2Q9UBS0 482 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 LIASO43766 372 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 FTH1P02794 183 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 LPOP22079 712 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 CORO1AP31146 461 aaKnown RBP17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 RASAL3Q86YV0 1011 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 B4GALNT2Q8NHY0 566 aa17.95■□□□□ 0.46
CDC42EP3-201ENST00000295324 HLA-DPA1P20036 260 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 PEX5P50542 639 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 AMIGO3Q86WK7 504 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 UBE2E3Q969T4 207 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 QRFPRQ96P65 431 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 KANSL1LA0AUZ9 987 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 CST3P01034 146 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 FGF1P05230 155 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 MMP8P22894 467 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 CXCR2P25025 360 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 GUCA1AP43080 201 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 CENPAP49450 140 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 GRB14Q14449 540 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 STXBP5Q5T5C0 1151 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 DTX3LQ8TDB6 740 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 ARMC7Q9H6L4 198 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 C10orf88Q9H8K7 445 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 XPNPEP1Q9NQW7 623 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 MPP6Q9NZW5 540 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 TRPC4Q9UBN4 977 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 CACNB4O00305 520 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 ADRA1DP25100 572 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 CPA2P48052 419 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 PTPN20Q4JDL3 420 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 ICE2Q659A1 982 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 CNDP1Q96KN2 507 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 KREMEN1Q96MU8 473 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 MID1IP1Q9NPA3 183 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 KLHL28Q9NXS3 571 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 VTI1BQ9UEU0 232 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 STXBP5LQ9Y2K9 1186 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 BGNP21810 368 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms