RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ATP13A1Q9HD20 1204 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 GPATCH2LQ9NWQ4 482 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 MYO1AQ9UBC5 1043 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 DNAI1Q9UI46 699 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 DOCK9Q9BZ29 2069 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 FRYLO94915 3013 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 A0A1B0GTW7 788 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 LRRC10BA6NIK2 292 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 METTL12A8MUP2 240 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 BCAT2O15382 392 aaPredicted RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 SMAD6O43541 496 aaKnown RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 CREB3O43889 395 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 RTN2O75298 545 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 IGLV3-19P01714 112 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 CCDC172P0C7W6 258 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 SRCP12931 536 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 PSMA2P25787 234 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 MAT2AP31153 395 aaKnown RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 HOXD12P35452 270 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 ACVRL1P37023 503 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 CSNK1EP49674 416 aaKnown RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 DNA2P51530 1060 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 OXCT1P55809 520 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 HDAC4P56524 1084 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 PPP2CBP62714 309 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 PPP2CAP67775 309 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 KRT83P78385 493 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 IL9RQ01113 521 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 FOXK2Q01167 660 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 KLHL30Q0D2K2 578 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 FOXC1Q12948 553 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 SLC12A1Q13621 1099 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 ELAVL3Q14576 367 aaKnown RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 DLG2Q15700 870 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 C6orf118Q5T5N4 469 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 N4BP2L1Q5TBK1 243 aaPredicted RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 KIAA0895LQ68EN5 471 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 C22orf39Q6P5X5 142 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 RABEPKQ7Z6M1 372 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 ADAT2Q7Z6V5 191 aaKnown RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 MCOLN2Q8IZK6 566 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 SH2D3CQ8N5H7 860 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 NETO2Q8NC67 525 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 CPLX3Q8WVH0 158 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 BIRC7Q96CA5 298 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 ZNF653Q96CK0 615 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 TBC1D31Q96DN5 1066 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 ALG14Q96F25 216 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 SLC6A18Q96N87 628 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 FAM129BQ96TA1 746 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 MYOCQ99972 504 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 C2orf49Q9BVC5 232 aaPredicted RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 ZYG11BQ9C0D3 744 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 IL21RQ9HBE5 538 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 SARDHQ9UL12 918 aa10.01□□□□□ -0.81
CCDC58-201ENST00000291458 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.01□□□□□ -0.81
CCDC58-201ENST00000291458 SPAARA0A1B0GVQ0 90 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 TARSL2A2RTX5 802 aaKnown RBP10□□□□□ -0.81
CCDC58-201ENST00000291458 KPNA3O00505 521 aaPredicted RBP10□□□□□ -0.81
CCDC58-201ENST00000291458 LRIG2O94898 1065 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 SYPP08247 313 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 PLEKP08567 350 aaPredicted RBP10□□□□□ -0.81
CCDC58-201ENST00000291458 ADRB1P08588 477 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 ADRA1BP35368 520 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 PTPN9P43378 593 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 PLK1P53350 603 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 GALCP54803 685 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 ADPRHP54922 357 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 UBASH3AP57075 661 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 OGDHQ02218 1023 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 ZBTB16Q05516 673 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 MTA1Q13330 715 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 EFHC2Q5JST6 749 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 ACAD10Q6JQN1 1059 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 LYPD8Q6UX82 237 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 ZNF571Q7Z3V5 609 aaPredicted RBP10□□□□□ -0.81
CCDC58-201ENST00000291458 BNIPLQ7Z465 357 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 IRF2BP2Q7Z5L9 587 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 RYBPQ8N488 228 aaPredicted RBP10□□□□□ -0.81
CCDC58-201ENST00000291458 DCAF4L2Q8NA75 395 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 CHST14Q8NCH0 376 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 CADM4Q8NFZ8 388 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 OR6K2Q8NGY2 324 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 PIP4K2CQ8TBX8 421 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 FRS2Q8WU20 508 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 CAMK1GQ96NX5 476 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 HAPLN3Q96S86 360 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 TM6SF2Q9BZW4 377 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 TRIM7Q9C029 511 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 SGK2Q9HBY8 427 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 TM9SF3Q9HD45 589 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 AASDHPPTQ9NRN7 309 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 NDFIP2Q9NV92 336 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 IFNKQ9P0W0 207 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 OR12D3Q9UGF7 316 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 FNDC3AQ9Y2H6 1198 aaKnown RBP10□□□□□ -0.81
CCDC58-201ENST00000291458 TBC1D30Q9Y2I9 924 aa10□□□□□ -0.81
CCDC58-201ENST00000291458 OR51B4Q9Y5P0 310 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms