RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 KCTD11Q693B1 232 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 PACS1Q6VY07 963 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 ZNF784Q8NCA9 323 aaPredicted RBP13.83□□□□□ -0.2
VMP1-201ENST00000262291 HMCESQ96FZ2 354 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 FICDQ9BVA6 458 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 BRD8Q9H0E9 1235 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 CATSPERBQ9H7T0 1116 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 BFARQ9NZS9 450 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 TLR6Q9Y2C9 796 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 NYNRINQ9P2P1 1898 aaKnown RBP13.83□□□□□ -0.2
VMP1-201ENST00000262291 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 TPP1O14773 563 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 KRT38O76015 456 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 KRT16P08779 473 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 NQO1P15559 274 aaKnown RBP13.83□□□□□ -0.2
VMP1-201ENST00000262291 ITKQ08881 620 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 NIPAL4Q0D2K0 466 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 GPR17Q13304 367 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 LAMB3Q13751 1172 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 RFWD3Q6PCD5 774 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 CMC1Q7Z7K0 106 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 CRIPAKQ8N1N5 446 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 FBXO22Q8NEZ5 403 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 RFWD2Q8NHY2 731 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 DPF3Q92784 378 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 PABPC5Q96DU9 382 aaKnown RBP13.83□□□□□ -0.2
VMP1-201ENST00000262291 SLC39A13Q96H72 371 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 MANSC1Q9H8J5 431 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.83□□□□□ -0.2
VMP1-201ENST00000262291 ARL2BPQ9Y2Y0 163 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 ACTL7AQ9Y615 435 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 EDF1O60869 148 aaKnown RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 POLBP06746 335 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 FESP07332 822 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 SAT1P21673 171 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 DNAJB2P25686 324 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 ETV4P43268 484 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 RANBP1P43487 201 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 SERPINB4P48594 390 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 ALDH7A1P49419 539 aaKnown RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 RIPK1Q13546 671 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 CES4AQ5XG92 561 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 ITPRIPL1Q6GPH6 555 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 FBXL22Q6P050 247 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 SLC39A5Q6ZMH5 540 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 ZCCHC23Q6ZST2 131 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 SLC25A41Q8N5S1 370 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 FITM2Q8N6M3 262 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 RTL3Q8N8U3 475 aaKnown RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 CERS2Q96G23 380 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 CAB39LQ9H9S4 337 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 CASS4Q9NQ75 786 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 ZNF358Q9NW07 568 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 IPO11Q9UI26 975 aaKnown RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 KIAA0100Q14667 2235 aaKnown RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 TLR5O60602 858 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 RTN3O95197 1032 aaPredicted RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 ALDOAP04075 364 aaKnown RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 SLC5A9Q2M3M2 681 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 ANKRD20A4Q4UJ75 823 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 CWF19L1Q69YN2 538 aaKnown RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 BEND5Q7L4P6 421 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 ANKLE1Q8NAG6 615 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 RPRD1AQ96P16 312 aaPredicted RBP13.82□□□□□ -0.2
VMP1-201ENST00000262291 ECT2Q9H8V3 914 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 NT5MQ9NPB1 228 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 PRKAG3Q9UGI9 489 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 ZNF180Q9UJW8 692 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 TRHDEQ9UKU6 1024 aa13.82□□□□□ -0.2
VMP1-201ENST00000262291 PDE4DIPQ5VU43 2346 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 A6NHS1 94 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 SLC38A8A6NNN8 435 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 TM9SF1O15321 606 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 AHCYL1O43865 530 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 GJB5O95377 273 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 COL6A1P12109 1028 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 MAGEA11P43364 429 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 NCALDP61601 193 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 COG7P83436 770 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 PDE1BQ01064 536 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 DLG2Q15700 870 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 LGSNQ5TDP6 509 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 ALKBH8Q96BT7 664 aaKnown RBP13.81□□□□□ -0.2
VMP1-201ENST00000262291 GLOD4Q9HC38 313 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 SSU72Q9NP77 194 aaKnown RBP13.81□□□□□ -0.2
VMP1-201ENST00000262291 TLR8Q9NR97 1041 aaKnown RBP13.81□□□□□ -0.2
VMP1-201ENST00000262291 IARS2Q9NSE4 1012 aaKnown RBP13.81□□□□□ -0.2
VMP1-201ENST00000262291 C20orf96Q9NUD7 363 aaPredicted RBP13.81□□□□□ -0.2
VMP1-201ENST00000262291 RAD54BQ9Y620 910 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 TBC1D4O60343 1298 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 ALDH1A2O94788 518 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 SEC24AO95486 1093 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 CCNCP24863 283 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
VMP1-201ENST00000262291 SLC18A1P54219 525 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 MXRA7P84157 204 aa13.81□□□□□ -0.2
VMP1-201ENST00000262291 PRPSAP1Q14558 356 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms