RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 MRPS6P82932 125 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 MAD2L1Q13257 205 aaPredicted RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 ABHD15Q6UXT9 468 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 GPR142Q7Z601 462 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 KRT78Q8N1N4 520 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 SLC25A23Q9BV35 468 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 KCNK4Q9NYG8 393 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 OR56A5P0C7T3 313 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 HOXD13P35453 343 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 CCT8P50990 548 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 SLC34A1Q06495 639 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 OASLQ15646 514 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 RAP1GAP2Q684P5 730 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 OLFML2BQ68BL8 750 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 DHFR2Q86XF0 187 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 ASB2Q96Q27 587 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 MPP6Q9NZW5 540 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 TPP1O14773 563 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 BUD23O43709 281 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 SEC22BO75396 215 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 PIAS1O75925 651 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 FARP2O94887 1054 aaPredicted RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 FGFR1P11362 822 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 CCNB1P14635 433 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 GRM5P41594 1212 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 IL2P60568 153 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 POLR2LP62875 67 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 OTUD3Q5T2D3 398 aaPredicted RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 DNAJC14Q6Y2X3 702 aaPredicted RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 PLEKHM3Q6ZWE6 761 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 C16orf59Q7L2K0 433 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 STN1Q9H668 368 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 COMMD8Q9NX08 183 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 AHSPQ9NZD4 102 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 RIPK3Q9Y572 518 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 LOC102724159A0A0B4J2E5 919 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 SAC3D1A6NKF1 404 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 YDJCA8MPS7 323 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 PDE5AO76074 875 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 KRT8P05787 483 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 ATP5BP06576 529 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 ABHD2P08910 425 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 GOT1P17174 413 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 MMP8P22894 467 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 MATKP42679 507 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 RPL14P50914 215 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 ALDH6A1Q02252 535 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 PLD1Q13393 1074 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 PWP2Q15269 919 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 FAM98BQ52LJ0 330 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 NECAB2Q7Z6G3 386 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 PWWP2AQ96N64 755 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 LGMNQ99538 433 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 BBS2Q9BXC9 721 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 POMKQ9H5K3 350 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 KRT84Q9NSB2 600 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 ST3GAL5Q9UNP4 418 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 ARAP2Q8WZ64 1704 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 DRD4P21917 467 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 CRYBB1P53674 252 aaPredicted RBP11.67□□□□□ -0.54
NOD1-201ENST00000222823 IRX1P78414 480 aaPredicted RBP11.67□□□□□ -0.54
NOD1-201ENST00000222823 HECTD3Q5T447 861 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 SIAH1Q8IUQ4 282 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 DTNBP1Q96EV8 351 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 MED8Q96G25 268 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 ACSS3Q9H6R3 686 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.67□□□□□ -0.54
NOD1-201ENST00000222823 TMEM191CA6NGB0 347 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 SNTNA6NMZ2 147 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 MSCO60682 206 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 MTA2O94776 668 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 GSTM1P09488 218 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 SERPINA4P29622 427 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 GPSM1Q86YR5 675 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 KIAA2013Q8IYS2 634 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 STK40Q8N2I9 435 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 EBNA1BP2Q99848 306 aaKnown RBP11.67□□□□□ -0.54
NOD1-201ENST00000222823 HGH1Q9BTY7 390 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 BDH2Q9BUT1 245 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 USE1Q9NZ43 259 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 TRPC4Q9UBN4 977 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 STRCP1A6NGW2 1772 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 ADGRA3Q8IWK6 1321 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 GLI3P10071 1580 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 MEI4A8MW99 385 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 A8MX80 341 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 GSNP06396 782 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 TSHRP16473 764 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 RPL9P32969 192 aaKnown RBP11.67□□□□□ -0.54
NOD1-201ENST00000222823 CHKAP35790 457 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 CD86P42081 329 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 IKBKEQ14164 716 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 PPP1R26Q5T8A7 1209 aaPredicted RBP11.67□□□□□ -0.54
NOD1-201ENST00000222823 PRMT9Q6P2P2 845 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 FUKQ8N0W3 1084 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 STAG3L4Q8TBR4 150 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 LPPQ93052 612 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms