RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 EPN2O95208 641 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 MED26O95402 600 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 CAVIN2O95810 425 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 F9P00740 461 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 ERBB2P04626 1255 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 EPHX1P07099 455 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 PABPC1P11940 636 aaKnown RBP6.61□□□□□ -1.35
TCF4-249ENST00000625716 GABRG2P18507 467 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 TACR2P21452 398 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 EPHA1P21709 976 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 CDC25BP30305 580 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 SLC6A4P31645 630 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
TCF4-249ENST00000625716 SOX5P35711 763 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 DPP6P42658 865 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 MATKP42679 507 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 KLK7P49862 253 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 ZNF165P49910 485 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 TAF5Q15542 800 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 MS4A13Q5J8X5 152 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 RABGAP1LQ5R372 815 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 FAM102AQ5T9C2 384 aaPredicted RBP6.61□□□□□ -1.35
TCF4-249ENST00000625716 RAP1GAP2Q684P5 730 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 MBLAC2Q68D91 279 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 LRSAM1Q6UWE0 723 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 KIAA1324Q6UXG2 1013 aaKnown RBP6.61□□□□□ -1.35
TCF4-249ENST00000625716 SLC36A4Q6YBV0 504 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 SLC26A9Q7LBE3 791 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 LGI2Q8N0V4 545 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 FIBINQ8TAL6 211 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 RLN3Q8WXF3 142 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 CPA5Q8WXQ8 436 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 ERLEC1Q96DZ1 483 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 SLC39A13Q96H72 371 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 SLC2A13Q96QE2 648 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 PPP1R9BQ96SB3 815 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 GABRG3Q99928 467 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 KRTAP4-12Q9BQ66 201 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 BPIFA3Q9BQP9 254 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 ZMYND15Q9H091 742 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 PRDM16Q9HAZ2 1276 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 VPS45Q9NRW7 570 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 SEPT11Q9NVA2 429 aaKnown RBP6.61□□□□□ -1.35
TCF4-249ENST00000625716 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.61□□□□□ -1.35
TCF4-249ENST00000625716 SUN2Q9UH99 717 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 CLEC4EQ9ULY5 219 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 RAD54BQ9Y620 910 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.61□□□□□ -1.35
TCF4-249ENST00000625716 CACNA1HO95180 2353 aa6.61□□□□□ -1.35
TCF4-249ENST00000625716 ZFHX2Q9C0A1 2572 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 A0A1W2PQF6 199 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ANKRD62A6NC57 917 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 LRRC10BA6NIK2 292 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 GOLGA8SH3BPF8 625 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ADAM11O75078 769 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 LUC7L3O95232 432 aaKnown RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 SERPINC1P01008 464 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ASLP04424 464 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 MMEP08473 750 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 DLDP09622 509 aaKnown RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 ZNF806P0C7X5 589 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ACPPP15309 386 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 GLB1P16278 677 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ZNF18P17022 549 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 HLA-FP30511 346 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 CDH5P33151 784 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 MPLP40238 635 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 NNMTP40261 264 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 P2RY2P41231 377 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 IL12RB1P42701 662 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 NSFP46459 744 aaKnown RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 GABRB2P47870 512 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 SULT1E1P49888 294 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 OXCT1P55809 520 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 RPS24P62847 133 aaKnown RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 CDR2Q01850 454 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 RPL6Q02878 288 aaKnown RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 DEUP1Q05D60 604 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ZNF234Q14588 700 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 PUM1Q14671 1186 aaKnown RBP eCLIP6.6□□□□□ -1.35
TCF4-249ENST00000625716 CCDC6Q16204 474 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 KLHL40Q2TBA0 621 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 PTPN20Q4JDL3 420 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 FAM133BQ5BKY9 247 aaKnown RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 SPDYCQ5MJ68 293 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ACBD5Q5T8D3 534 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 NAA35Q5VZE5 725 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 RNF219Q5W0B1 726 aaPredicted RBP6.6□□□□□ -1.35
TCF4-249ENST00000625716 PMS2CLQ68D20 193 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 IL31Q6EBC2 164 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 NADSYN1Q6IA69 706 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 DPY19L2P1Q6NXN4 242 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 OLFML1Q6UWY5 402 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 LRRC31Q6UY01 552 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 TRIM72Q6ZMU5 477 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 DGLUCYQ7Z3D6 616 aa6.6□□□□□ -1.35
TCF4-249ENST00000625716 NOP9Q86U38 636 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms