RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 MTFMTQ96DP5 389 aaKnown RBP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 FAM120BQ96EK7 910 aaKnown RBP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 P2RY11Q96G91 374 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 HSFY1Q96LI6 401 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 TINF2Q9BSI4 451 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ATP11BQ9Y2G3 1177 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 RGPD8O14715 1765 aaPredicted RBP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 PCNAP12004 261 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 NAB1Q13506 487 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 DEPDC1Q5TB30 811 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 LZTR1Q8N653 840 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 CLEC4DQ8WXI8 215 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 OTUB1Q96FW1 271 aaPredicted RBP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 VAT1Q99536 393 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ENTPD7Q9NQZ7 604 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 LINC00854A0A1B0GVQ3 168 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 GNG14A0A1W2PPG7 69 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 PSMD12O00232 456 aaPredicted RBP16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ARIH2O95376 493 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ANPEPP15144 967 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 RAP1GAP2Q684P5 730 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 TFAP2BQ92481 460 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 CLPTM1LQ96KA5 538 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 NSMCE2Q96MF7 247 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 LRMDAQ9H2I8 198 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ARHGAP28Q9P2N2 729 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
GABRB3-215ENST00000622697 EME2A4GXA9 379 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-215ENST00000622697 RMND5BQ96G75 393 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-215ENST00000622697 DPY30Q9C005 99 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 RMND5AQ9H871 391 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 DMAC2Q9NW81 257 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 MORF4L1Q9UBU8 362 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 PCDHA2Q9Y5H9 948 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 TBKBP1A7MCY6 615 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 PGM3O95394 542 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 SREBF2Q12772 1141 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 CERCAMQ5T4B2 595 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 IQSEC1Q6DN90 963 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 TAF2Q6P1X5 1199 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 SCIMPQ6UWF3 145 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 PACS1Q6VY07 963 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 NET1Q7Z628 596 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-215ENST00000622697 ZNF467Q7Z7K2 595 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-215ENST00000622697 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 TBCDQ9BTW9 1192 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 ACE2Q9BYF1 805 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-215ENST00000622697 NMUR2Q9GZQ4 415 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 PARVBQ9HBI1 364 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 SFMBT1Q9UHJ3 866 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 RAD54BQ9Y620 910 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 CLOCKO15516 846 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 STAU1O95793 577 aaKnown RBP16.39■□□□□ 0.21
GABRB3-215ENST00000622697 NOMO1Q15155 1222 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 ULK2Q8IYT8 1036 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 GSTCDQ8NEC7 633 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 DDHD1Q8NEL9 900 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 MRPS31Q92665 395 aaKnown RBP16.39■□□□□ 0.21
GABRB3-215ENST00000622697 ROGDIQ9GZN7 287 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 C2CD2Q9Y426 696 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 ABCB1P08183 1280 aaPredicted RBP16.39■□□□□ 0.21
GABRB3-215ENST00000622697 IL5RAQ01344 420 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 ANKS3Q6ZW76 656 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 HGH1Q9BTY7 390 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 KANSL1LA0AUZ9 987 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 F8W810 466 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 DCAF12L1Q5VU92 463 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 TRPC4APQ8TEL6 797 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 CAPN10Q9HC96 672 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 STARD7Q9NQZ5 370 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 TRPV2Q9Y5S1 764 aa16.39■□□□□ 0.21
GABRB3-215ENST00000622697 EPB42P16452 691 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 TRIM16LQ309B1 348 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 TTC7BQ86TV6 843 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 CLVS1Q8IUQ0 354 aaPredicted RBP16.38■□□□□ 0.21
GABRB3-215ENST00000622697 ATG16L2Q8NAA4 619 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 FAM13CQ8NE31 585 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 ZFYVE19Q96K21 471 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 LIMD1Q9UGP4 676 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 STK25O00506 426 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 GRIN3BO60391 1043 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 PEX11AO75192 247 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 SEC22BO75396 215 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 MATKP42679 507 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 CCT8P50990 548 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 BNIPLQ7Z465 357 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 NRCAMQ92823 1304 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 ERLEC1Q96DZ1 483 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 GPR20Q99678 358 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 ABCC13Q9NSE7 274 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 POLG2Q9UHN1 485 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 PGK1P00558 417 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 CYP4X1Q8N118 509 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 GPR152Q8TDT2 470 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 XPR1Q9UBH6 696 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 TNFAIP8O95379 198 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 CHI3L1P36222 383 aaPredicted RBP16.38■□□□□ 0.21
GABRB3-215ENST00000622697 PRKAA2P54646 552 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms