RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SLC8A1P32418 973 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 ACADSBP45954 432 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 ZNF75DP51815 510 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 FMO1Q01740 532 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 DNAJC3Q13217 504 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 PDCLQ13371 301 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 SUZ12Q15022 739 aaKnown RBP16.12■□□□□ 0.17
SKA2-209ENST00000583976 SMAD1Q15797 465 aaKnown RBP16.12■□□□□ 0.17
SKA2-209ENST00000583976 SOWAHCQ53LP3 525 aaPredicted RBP16.12■□□□□ 0.17
SKA2-209ENST00000583976 ZNF677Q86XU0 584 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 TMEM35BQ8NCS4 154 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 OR2T34Q8NGX1 318 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 PPP1R13BQ96KQ4 1090 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 CPXM1Q96SM3 734 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 FAM129BQ96TA1 746 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 ELF4Q99607 663 aaPredicted RBP16.12■□□□□ 0.17
SKA2-209ENST00000583976 OMDQ99983 421 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 DDX50Q9BQ39 737 aaKnown RBP16.12■□□□□ 0.17
SKA2-209ENST00000583976 SLC4A5Q9BY07 1137 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 IRX2Q9BZI1 471 aaPredicted RBP16.12■□□□□ 0.17
SKA2-209ENST00000583976 AIPL1Q9NZN9 384 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 FZD4Q9ULV1 537 aa16.12■□□□□ 0.17
SKA2-209ENST00000583976 SYNJ2BP-COX16A0A087WUM0 186 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 EDDM13A0A1B0GTR0 161 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 A0A1W2PR77 199 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 TRABD2BA6NFA1 517 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 RNASEH1O60930 286 aaKnown RBP16.11■□□□□ 0.17
SKA2-209ENST00000583976 TRUB2O95900 331 aaKnown RBP16.11■□□□□ 0.17
SKA2-209ENST00000583976 DRD3P35462 400 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 ZBED6P86452 979 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 ECT2LQ008S8 904 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 ARID5BQ14865 1188 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 POM121L1PQ3SYA9 428 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 NAA35Q5VZE5 725 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 CXorf57Q6NSI4 855 aaKnown RBP16.11■□□□□ 0.17
SKA2-209ENST00000583976 TMC6Q7Z403 805 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 OR52K2Q8NGK3 314 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 STK32AQ8WU08 396 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 CPA5Q8WXQ8 436 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 PTPRN2Q92932 1015 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 IQCDQ96DY2 449 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 LRIG1Q96JA1 1093 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 BBC3Q96PG8 261 aaPredicted RBP16.11■□□□□ 0.17
SKA2-209ENST00000583976 NOX5Q96PH1 765 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 AGPAT1Q99943 283 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 HAUS4Q9H6D7 363 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 SYNCQ9H7C4 482 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 FAM204AQ9H8W3 233 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 COX16Q9P0S2 106 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 ADAMTS1Q9UHI8 967 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 SCML1Q9UN30 329 aa16.11■□□□□ 0.17
SKA2-209ENST00000583976 LRRC72A6NJI9 287 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 F5H5T6 163 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 CAPN9O14815 690 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 SART1O43290 800 aaKnown RBP16.1■□□□□ 0.17
SKA2-209ENST00000583976 IL1BP01584 269 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 SRPRAP08240 638 aaKnown RBP16.1■□□□□ 0.17
SKA2-209ENST00000583976 TNFAIP3P21580 790 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 EPHA8P29322 1005 aaPredicted RBP16.1■□□□□ 0.17
SKA2-209ENST00000583976 NOMO3P69849 1222 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 KLHL30Q0D2K2 578 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 INAVAQ3KP66 663 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 PTPN20Q4JDL3 420 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 C2CD6Q53TS8 623 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 RNF219Q5W0B1 726 aaPredicted RBP16.1■□□□□ 0.17
SKA2-209ENST00000583976 TMEM110Q86TL2 294 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 CCAR2Q8N163 923 aaKnown RBP16.1■□□□□ 0.17
SKA2-209ENST00000583976 GALNT15Q8N3T1 639 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 KDM1BQ8NB78 822 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 OR14C36Q8NHC7 312 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 SERAC1Q96JX3 654 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 PCDHB18PQ96TA0 734 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 PRMT1Q99873 361 aaKnown RBP16.1■□□□□ 0.17
SKA2-209ENST00000583976 DOCK9Q9BZ29 2069 aa16.1■□□□□ 0.17
SKA2-209ENST00000583976 TARSL2A2RTX5 802 aaKnown RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 ENC1O14682 589 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 RTN2O75298 545 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 GRAP2O75791 330 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 MOCS3O95396 460 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 LSM8O95777 96 aaKnown RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 ERBB2P04626 1255 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 CYP1A1P04798 512 aaPredicted RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 TPM1P09493 284 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 GOT1P17174 413 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 CD38P28907 300 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 MAT2AP31153 395 aaKnown RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 CDH5P33151 784 aaPredicted RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 ACADVLP49748 655 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 NXPH1P58417 271 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 EIF4EBP2Q13542 120 aaPredicted RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 TRIM14Q14142 442 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 ELAVL3Q14576 367 aaKnown RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 OR6B2Q6IFH4 312 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 SND1Q7KZF4 910 aaKnown RBP eCLIP16.09■□□□□ 0.17
SKA2-209ENST00000583976 ERICH1Q86X53 443 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 CCDC117Q8IWD4 279 aaPredicted RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
SKA2-209ENST00000583976 SLC30A5Q8TAD4 765 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 SAP25Q8TEE9 199 aa16.09■□□□□ 0.17
SKA2-209ENST00000583976 FRS2Q8WU20 508 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms