RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RASA4BC9J798 803 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 SGK1O00141 431 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 SLC9A3R1O14745 358 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-205ENST00000564899 NCAM2O15394 837 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 RASA4O43374 803 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 RAMP2O60895 175 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 CYBBP04839 570 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 FCARP24071 287 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 RBL1P28749 1068 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 OR1E1P30953 314 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 IFNAR2P48551 515 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 NDST2P52849 883 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 SLC7A5Q01650 507 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 ZNF177Q13360 481 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-205ENST00000564899 PRKD1Q15139 912 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-205ENST00000564899 PPP1R7Q15435 360 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 SLC45A4Q5BKX6 768 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 C6orf118Q5T5N4 469 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 AFMIDQ63HM1 303 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 TPGS1Q6ZTW0 290 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 SYDE1Q6ZW31 735 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-205ENST00000564899 B4GALNT4Q76KP1 1039 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 CARNMT1Q8N4J0 409 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 ATPAF2Q8N5M1 289 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 KIAA1958Q8N8K9 716 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 FAM71DQ8N9W8 422 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 CCNYQ8ND76 341 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 BPIFB1Q8TDL5 484 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 DDI1Q8WTU0 396 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 LRRN4Q8WUT4 740 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 RUBCNQ92622 972 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 SLCO2A1Q92959 643 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 BHMTQ93088 406 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 OTUB2Q96DC9 234 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 LRRC3BQ96PB8 259 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 TRIM51Q9BSJ1 452 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 SLC39A8Q9C0K1 460 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 BRD8Q9H0E9 1235 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 NOL6Q9H6R4 1146 aaKnown RBP11.35□□□□□ -0.59
SF3B3-205ENST00000564899 TRPV4Q9HBA0 871 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 OBP2AQ9NY56 170 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 WNT16Q9UBV4 365 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 MTF2Q9Y483 593 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-205ENST00000564899 CEP295Q9C0D2 2601 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 UQCRHLA0A096LP55 91 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 ARHGAP42A6NI28 874 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 H0Y626 953 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 KCNN4O15554 427 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 CTIFO43310 598 aaKnown RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 ZNF189O75820 626 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 HEXIM1O94992 359 aaKnown RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 LUC7L3O95232 432 aaKnown RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 IFNB1P01574 187 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 KRT14P02533 472 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 UQCRHP07919 91 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 RHOCP08134 193 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 VAV1P15498 845 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 GARSP41250 739 aaKnown RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 PAPOLAP51003 745 aaKnown RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 GDF10P55107 478 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 YBEYP58557 167 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 PPIDQ08752 370 aaKnown RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 AP1B1Q10567 949 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 CDH18Q13634 790 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 PTK6Q13882 451 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 NAA30Q147X3 362 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 POLD3Q15054 466 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 ELF2Q15723 593 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 KCTD19Q17RG1 926 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 PARP15Q460N3 678 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 MPP7Q5T2T1 576 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 HEATR6Q6AI08 1181 aaKnown RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 SETD3Q86TU7 594 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 ZNF354CQ86Y25 554 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 C1orf210Q8IVY1 113 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 CCDC117Q8IWD4 279 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 CCDC89Q8N998 374 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 DEPDC1BQ8WUY9 529 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 OSCP1Q8WVF1 389 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 E2F7Q96AV8 911 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 HDAC11Q96DB2 347 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 HMCESQ96FZ2 354 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 LGMNQ99538 433 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 FERMT1Q9BQL6 677 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 RAB17Q9H0T7 212 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 EPC1Q9H2F5 836 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 LINC00597Q9H2U6 94 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 ANKZF1Q9H8Y5 726 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 ZFP14Q9HCL3 533 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 ARHGEF3Q9NR81 526 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 DUS2Q9NX74 493 aaKnown RBP11.34□□□□□ -0.59
SF3B3-205ENST00000564899 EPS15L1Q9UBC2 864 aa11.34□□□□□ -0.59
SF3B3-205ENST00000564899 HELZP42694 1942 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 ILVBLA1L0T0 632 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 TARSL2A2RTX5 802 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 STK10O94804 968 aaKnown RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 SRFP11831 508 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 LAMP2P13473 410 aa11.33□□□□□ -0.6
SF3B3-205ENST00000564899 HOXD9P28356 352 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-205ENST00000564899 STIP1P31948 543 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms