RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 TRIM43BA6NCK2 446 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 CAPN14A8MX76 684 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 KPNA7A9QM74 516 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 FOXN3O00409 490 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 PIRO00625 290 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 MED7O43513 233 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 TRAPPC3O43617 180 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 AKR1B10O60218 316 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 TADA2AO75478 443 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 BAIAP3O94812 1187 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 ASS1P00966 412 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 POMCP01189 267 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 ADH4P08319 380 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 KRT5P13647 590 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 LRPAP1P30533 357 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 HNRNPH3P31942 346 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 SOX5P35711 763 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 MLH1P40692 756 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 SCNN1GP51170 649 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 INHBCP55103 352 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 MYL6P60660 151 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 NOP14P78316 857 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 KRT83P78385 493 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 CDK17Q00537 523 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 ROM1Q03395 351 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 GRIK3Q13003 919 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 CUL2Q13617 745 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 DRAP1Q14919 205 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 SPA17Q15506 151 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 TDRD12Q587J7 1177 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 CRB2Q5IJ48 1285 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 NOMO2Q5JPE7 1267 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 GLRA4Q5JXX5 417 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 CATSPEREQ5SY80 951 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 SPOUT1Q5T280 376 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 C10orf76Q5T2E6 689 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 C9orf57Q5W0N0 161 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 DCLRE1AQ6PJP8 1040 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 DSTYKQ6XUX3 929 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 ZNF662Q6ZS27 426 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 IRF2BP2Q7Z5L9 587 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 METTL23Q86XA0 190 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 ZNF677Q86XU0 584 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 TMPRSS6Q8IU80 811 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 ARHGEF19Q8IW93 802 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 GCDHQ92947 438 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 TRIM43Q96BQ3 446 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 ZNF830Q96NB3 372 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 ZMAT2Q96NC0 199 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 PPP1R10Q96QC0 940 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 LBHD1Q9BQE6 289 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 PI4K2AQ9BTU6 479 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.89□□□□□ -1.63
CDR2-203ENST00000563573 COLEC11Q9BWP8 271 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 MRPL9Q9BYD2 267 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 TTYH3Q9C0H2 523 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 WNT8AQ9H1J5 351 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 MTIF3Q9H2K0 278 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 NHEJ1Q9H9Q4 299 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 CYP3A43Q9HB55 503 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 SIX2Q9NPC8 291 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 IL23AQ9NPF7 189 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 MIOSQ9NXC5 875 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 KIAA1257Q9ULG3 409 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 NR2E3Q9Y5X4 410 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 EPN1Q9Y6I3 576 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 FNDC1Q4ZHG4 1894 aaPredicted RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 PTPRJQ12913 1337 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 UMODL1Q5DID0 1318 aa4.89□□□□□ -1.63
CDR2-203ENST00000563573 KIAA0100Q14667 2235 aaKnown RBP4.89□□□□□ -1.63
CDR2-203ENST00000563573 MYH10P35580 1976 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 TLDC2A0PJX2 215 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 ANO9A1A5B4 782 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 EIF3CLB5ME19 914 aaKnown RBP4.88□□□□□ -1.63
CDR2-203ENST00000563573 F8VZ95 297 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 PODXLO00592 558 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 CYB561D2O14569 222 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 PTGESO14684 152 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 PLD2O14939 933 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 EPHB6O15197 1021 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 INPPL1O15357 1258 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 GFPT2O94808 682 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 CYP17A1P05093 508 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 C1SP09871 688 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 WEE2P0C1S8 567 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 CSF2RAP15509 400 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 CD58P19256 250 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 ANXA13P27216 316 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 GNL1P36915 607 aaPredicted RBP4.88□□□□□ -1.63
CDR2-203ENST00000563573 PRKCIP41743 596 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 OR1G1P47890 313 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 LHX1P48742 406 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 PDE6CP51160 858 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 CLCNKBP51801 687 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 LILRA4P59901 499 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 APBA1Q02410 837 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 FPGSQ05932 587 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 GOLGA8FQ08AF8 430 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 GOLGA8DPQ0D2H9 430 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms