RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GRAMD4Q6IC98 578 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 RETSATQ6NUM9 610 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 ALLCQ8N6M5 410 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 HTR3CQ8WXA8 447 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 RUBCNQ92622 972 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 RTP4Q96DX8 246 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 KRT12Q99456 494 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 PLA2G2FQ9BZM2 168 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 NOL6Q9H6R4 1146 aaKnown RBP14.83□□□□□ -0.04
SHMT2-210ENST00000553950 C8orf33Q9H7E9 229 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-210ENST00000553950 KCNK12Q9HB15 430 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 PCDH9Q9HC56 1237 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 NDFIP2Q9NV92 336 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 PLK2Q9NYY3 685 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 DEC1Q9P2X7 70 aa14.83□□□□□ -0.04
SHMT2-210ENST00000553950 SAE1Q9UBE0 346 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-210ENST00000553950 ARNTLO00327 626 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 KCNN4O15554 427 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 KDELR3O43731 214 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 MAFKO60675 156 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 PRAMEF11O60813 436 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 OPHN1O60890 802 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 GLULP15104 373 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 IL9P15248 144 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 HSPA9P38646 679 aaKnown RBP14.82□□□□□ -0.04
SHMT2-210ENST00000553950 CSKP41240 450 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 RENBPP51606 427 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 IFI35P80217 286 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-210ENST00000553950 LMAN2Q12907 356 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 PLEKHG6Q3KR16 790 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 ITPRIPL1Q6GPH6 555 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 ETFBKMTQ8IXQ9 262 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 ATXN2LQ8WWM7 1075 aaKnown RBP14.82□□□□□ -0.04
SHMT2-210ENST00000553950 ZFYVE19Q96K21 471 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 FEM1AQ9BSK4 669 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 ACE2Q9BYF1 805 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-210ENST00000553950 ABCB8Q9NUT2 735 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 UBA2Q9UBT2 640 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-210ENST00000553950 SLC25A13Q9UJS0 675 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 FBXO10Q9UK96 956 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 TRHDEQ9UKU6 1024 aa14.82□□□□□ -0.04
SHMT2-210ENST00000553950 RIOK3O14730 519 aaKnown RBP14.81□□□□□ -0.04
SHMT2-210ENST00000553950 MATN3O15232 486 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 TULP3O75386 442 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 MAP3K6O95382 1288 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 SRFP11831 508 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 HLA-FP30511 346 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 CLCN6P51797 869 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 SLC20A2Q08357 652 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 TDGQ13569 410 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 PTK6Q13882 451 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 HNRNPDQ14103 355 aaKnown RBP14.81□□□□□ -0.04
SHMT2-210ENST00000553950 ZNF235Q14590 738 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 PITRM1Q5JRX3 1037 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 TTC27Q6P3X3 843 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 RALGPS2Q86X27 583 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-210ENST00000553950 OR7D4Q8NG98 312 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 UCMAQ8WVF2 138 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 MAML1Q92585 1016 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 LRRC45Q96CN5 670 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 P2RY11Q96G91 374 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 LGMNQ99538 433 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 FAM118BQ9BPY3 351 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 TMEM121Q9BTD3 319 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 SPON2Q9BUD6 331 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 SLC2A4RGQ9NR83 387 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 PAK5Q9P286 719 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 LIMD1Q9UGP4 676 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 SLC8A2Q9UPR5 921 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 UTP11Q9Y3A2 253 aaKnown RBP14.81□□□□□ -0.04
SHMT2-210ENST00000553950 OR51B4Q9Y5P0 310 aa14.81□□□□□ -0.04
SHMT2-210ENST00000553950 MYO18AQ92614 2054 aaKnown RBP14.81□□□□□ -0.04
SHMT2-210ENST00000553950 MUC22E2RYF6 1773 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-210ENST00000553950 MYO10Q9HD67 2058 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 A0A0A0MRY4 1105 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 A0A0D9SEW6 157 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 GOLGA6CA6NDK9 693 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 GOLGA6BA6NDN3 693 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 C5orf60A6NFR6 353 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 RNF103O00237 685 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 CBX4O00257 560 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 TIMM44O43615 452 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 IFNB1P01574 187 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 ATP5BP06576 529 aaKnown RBP14.8□□□□□ -0.04
SHMT2-210ENST00000553950 GOLGA6DP0CG33 693 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 CCNB1P14635 433 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 VAV1P15498 845 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 POLR2EP19388 210 aaKnown RBP14.8□□□□□ -0.04
SHMT2-210ENST00000553950 RBL1P28749 1068 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 GJA4P35212 333 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 NNMTP40261 264 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 VASPP50552 380 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-210ENST00000553950 TFF2Q03403 129 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 ZP2Q05996 745 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 TNK2Q07912 1038 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 INO80DQ53TQ3 878 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-210ENST00000553950 FSCBQ5H9T9 825 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 ARHGEF18Q6ZSZ5 1173 aa14.8□□□□□ -0.04
SHMT2-210ENST00000553950 KIAA0907Q7Z7F0 614 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-210ENST00000553950 JAMLQ86YT9 394 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms