RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 CDC16Q13042 620 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 KLF10Q13118 480 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 FAM35AQ86V20 835 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 CNTN4Q8IWV2 1026 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 CPSF7Q8N684 471 aaKnown RBP14.89□□□□□ -0.03
LETMD1-209ENST00000547318 ZFAND2BQ8WV99 257 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 SMARCD1Q96GM5 515 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 VPS39Q96JC1 886 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 BTBD9Q96Q07 612 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 PARK7Q99497 189 aaKnown RBP14.89□□□□□ -0.03
LETMD1-209ENST00000547318 COLEC11Q9BWP8 271 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 TCF7L2Q9NQB0 619 aa14.89□□□□□ -0.03
LETMD1-209ENST00000547318 GNEQ9Y223 722 aaKnown RBP14.89□□□□□ -0.03
LETMD1-209ENST00000547318 KCNK1O00180 336 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 MATN2O00339 956 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 ANXA9O76027 345 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 BAG2O95816 211 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 FYNP06241 537 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 NCF2P19878 526 aaPredicted RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 ITGAXP20702 1163 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 PSEN2P49810 448 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 SLC25A3Q00325 362 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 SLC12A1Q13621 1099 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 PPM1JQ5JR12 505 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 PM20D1Q6GTS8 502 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 ZFP1Q6P2D0 407 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 TDRD5Q8NAT2 981 aaKnown RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 SMG8Q8ND04 991 aaKnown RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 GSTCDQ8NEC7 633 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 RP9Q8TA86 221 aaKnown RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 DNAJB3Q8WWF6 145 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 CLPTM1LQ96KA5 538 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 TTC1Q99614 292 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 KLHL4Q9C0H6 718 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 C20orf96Q9NUD7 363 aaPredicted RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 KLK14Q9P0G3 267 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 RNF181Q9P0P0 153 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 C6orf203Q9P0P8 240 aaPredicted RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 SLC17A6Q9P2U8 582 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 AP1G2O75843 785 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 DDHD2O94830 711 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 RPLP2P05387 115 aaKnown RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 CCNCP24863 283 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 RPL9P32969 192 aaKnown RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 RPL14P50914 215 aaKnown RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 MAP3K7CLP57077 242 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 PITX1P78337 314 aaPredicted RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 TBL3Q12788 808 aaKnown RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 PCID2Q5JVF3 399 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 WSCD1Q658N2 575 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 SEL1L3Q68CR1 1132 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 CMC1Q7Z7K0 106 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 PDSS2Q86YH6 399 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 LRRC49Q8IUZ0 686 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 KBTBD2Q8IY47 623 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 CATSPER1Q8NEC5 780 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 DPF3Q92784 378 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 MLPHQ9BV36 600 aaPredicted RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 ACE2Q9BYF1 805 aaPredicted RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 WDCPQ9H6R7 721 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 CSNK1G1Q9HCP0 422 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 DDIT4Q9NX09 232 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.88□□□□□ -0.03
LETMD1-209ENST00000547318 FNIP2Q9P278 1114 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 PPM1HQ9ULR3 514 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 POMPQ9Y244 141 aa14.88□□□□□ -0.03
LETMD1-209ENST00000547318 RGSL1A5PLK6 1076 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 BTBD19C9JJ37 291 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 FGF10O15520 208 aaPredicted RBP14.87□□□□□ -0.03
LETMD1-209ENST00000547318 SMIM24O75264 130 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 SKAP2O75563 359 aaPredicted RBP14.87□□□□□ -0.03
LETMD1-209ENST00000547318 BEST1O76090 585 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 LYNP07948 512 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 NCAM1P13591 858 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 NFKB1P19838 968 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 CD68P34810 354 aaPredicted RBP14.87□□□□□ -0.03
LETMD1-209ENST00000547318 EPHX2P34913 555 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 HSP90AA5PQ58FG0 334 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 TAF2Q6P1X5 1199 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 POTEHQ6S545 545 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 UCMAQ8WVF2 138 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 MS4A4AQ96JQ5 239 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 SENP8Q96LD8 212 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 AGAP3Q96P47 875 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 CEP41Q9BYV8 373 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 UBE2OQ9C0C9 1292 aaKnown RBP14.87□□□□□ -0.03
LETMD1-209ENST00000547318 YIPF3Q9GZM5 350 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
LETMD1-209ENST00000547318 MRPL40Q9NQ50 206 aaKnown RBP14.87□□□□□ -0.03
LETMD1-209ENST00000547318 STK39Q9UEW8 545 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 NR2E3Q9Y5X4 410 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 SYNJ2BP-COX16A0A087WUM0 186 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 CCL15-CCL14A0A0B4J2E2 113 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 MEI4A8MW99 385 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 CLDN5O00501 218 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 PTGESO14684 152 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 NRP1O14786 923 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 DYNC1LI2O43237 492 aaPredicted RBP14.87□□□□□ -0.03
LETMD1-209ENST00000547318 NPHS1O60500 1241 aa14.87□□□□□ -0.03
LETMD1-209ENST00000547318 PAMP19021 973 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms