RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 GRM3Q14832 879 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 TCHHL1Q5QJ38 904 aaPredicted RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 C6orf163Q5TEZ5 329 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 RGS9BPQ6ZS82 235 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PTAR1Q7Z6K3 402 aaPredicted RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 C14orf80Q86SX3 495 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 IFNL1Q8IU54 200 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PHACTR1Q9C0D0 580 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 SSU72Q9NP77 194 aaKnown RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 CYLDQ9NQC7 956 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 THAP1Q9NVV9 213 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 MOCS1Q9NZB8 636 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 C1QAP02745 245 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 DHRS4L1P0CG22 281 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 CPB1P15086 417 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 TCN1P20061 433 aaPredicted RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 CALB2P22676 271 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PEX19P40855 299 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 SLC18A1P54219 525 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 CCDC15Q0P6D6 951 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 MGAT5BQ3V5L5 792 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 ACSBG2Q5FVE4 666 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 ITPRIPL1Q6GPH6 555 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 SH2D5Q6ZV89 423 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 CHSY1Q86X52 802 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 RASAL3Q86YV0 1011 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF781Q8N8C0 355 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 URGCPQ8TCY9 931 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 GIPC2Q8TF65 315 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 VPS39Q96JC1 886 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 SPON2Q9BUD6 331 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 GTSE1Q9NYZ3 720 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 FETUBQ9UGM5 382 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 NEMP2A6NFY4 417 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 HAS3O00219 553 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 DUSP11O75319 330 aaKnown RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PROCP04070 461 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PRKCGP05129 697 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 TSHRP16473 764 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 EPHA3P29320 983 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 GATMP50440 423 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 UPP1Q16831 310 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 GEN1Q17RS7 908 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 RGMBQ6NW40 437 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 ABI1Q8IZP0 508 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 CNTD1Q8N815 330 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PIWIL2Q8TC59 973 aaKnown RBP8.87□□□□□ -0.99
UBE3B-208ENST00000538070 SLC26A7Q8TE54 656 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF570Q96NI8 536 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 NUF2Q9BZD4 464 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 SLC39A8Q9C0K1 460 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 BRD8Q9H0E9 1235 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 CXorf56Q9H5V9 222 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 NMUR1Q9HB89 426 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PNPLA8Q9NP80 782 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 DNAJB4Q9UDY4 337 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 MCM8Q9UJA3 840 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF180Q9UJW8 692 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 EMCNQ9ULC0 261 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 PLA2G4CQ9UP65 541 aa8.87□□□□□ -0.99
UBE3B-208ENST00000538070 GABRDO14764 452 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 AP2A1O95782 977 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 HOXD8P13378 290 aaPredicted RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 MPSTP25325 297 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 LRPAP1P30533 357 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 PSMD5Q16401 504 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 FBXO48Q5FWF7 155 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF470Q6ECI4 717 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 FAM117BQ6P1L5 589 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 C4orf22Q6V702 233 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 C4orf50Q6ZRC1 276 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 CFAP52Q8N1V2 620 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 PYDC1Q8WXC3 89 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 PHF21BQ96EK2 531 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 OSBPL1AQ9BXW6 950 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 DCDC2Q9UHG0 476 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SBF1O95248 1867 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 MANSC4A6NHS7 340 aaPredicted RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 F9P00740 461 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SOX11P35716 441 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 GLUD2P49448 558 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 OCRLQ01968 901 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 CSHL1Q14406 222 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 PTPRCAPQ14761 206 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 CTC1Q2NKJ3 1217 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 INTS6LQ5JSJ4 861 aaKnown RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 C10orf120Q5SQS8 335 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 TEDDM1Q5T9Z0 273 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 GLB1LQ6UWU2 654 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SDCCAG8Q86SQ7 713 aaPredicted RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 PDCD6IPQ8WUM4 868 aaKnown RBP8.86□□□□□ -0.99
UBE3B-208ENST00000538070 INPP5DQ92835 1189 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SKA1Q96BD8 255 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SLC2A13Q96QE2 648 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 NMRAL1Q9HBL8 299 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 COPG2Q9UBF2 871 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 SLC45A1Q9Y2W3 748 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 MYO7AQ13402 2215 aa8.86□□□□□ -0.99
UBE3B-208ENST00000538070 OR51F1A6NGY5 319 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms