RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 GET4Q7L5D6 327 aaPredicted RBP6.87□□□□□ -1.31
PVT1-217ENST00000523190 FAM217AQ8IXS0 508 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 CARNMT1Q8N4J0 409 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 ZCCHC9Q8N567 271 aaKnown RBP6.87□□□□□ -1.31
PVT1-217ENST00000523190 TDRD5Q8NAT2 981 aaKnown RBP6.87□□□□□ -1.31
PVT1-217ENST00000523190 HJURPQ8NCD3 748 aaPredicted RBP6.87□□□□□ -1.31
PVT1-217ENST00000523190 OR7D4Q8NG98 312 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 ITFG1Q8TB96 612 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 ARHGEF2Q92974 986 aaKnown RBP6.87□□□□□ -1.31
PVT1-217ENST00000523190 USP13Q92995 863 aaPredicted RBP6.87□□□□□ -1.31
PVT1-217ENST00000523190 BHMTQ93088 406 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 EXOC4Q96A65 974 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 ZSWIM3Q96MP5 696 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 AGAP3Q96P47 875 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 ZIM3Q96PE6 472 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 TSGA13Q96PP4 275 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 GORASP1Q9BQQ3 440 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 GBA3Q9H227 469 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 PRO3102Q9H379 93 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 CDC42EP4Q9H3Q1 356 aaKnown RBP6.87□□□□□ -1.31
PVT1-217ENST00000523190 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 SAYSD1Q9NPB0 183 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 DZANK1Q9NVP4 752 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 DONSONQ9NYP3 566 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 OGFRQ9NZT2 677 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 IGSF9Q9P2J2 1179 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 RSPH14Q9UHP6 348 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 IPO11Q9UI26 975 aaKnown RBP6.87□□□□□ -1.31
PVT1-217ENST00000523190 STOML2Q9UJZ1 356 aa6.87□□□□□ -1.31
PVT1-217ENST00000523190 MKI67P46013 3256 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 NOTCH4Q99466 2003 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 DOCK4Q8N1I0 1966 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 A0A0D9SEW6 157 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 E2F8A0AVK6 867 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 TYW5A2RUC4 315 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 H0Y626 953 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 SMAPO00193 183 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 MATN3O15232 486 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 NEBLO76041 1014 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 LUC7L3O95232 432 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 PEX11BO96011 259 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 APRTP07741 180 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 CCNB1P14635 433 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 TPSB2P20231 275 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 HOXD9P28356 352 aaPredicted RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 MAGEA6P43360 314 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 LMAN1P49257 510 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 ARL4CP56559 192 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 GNA12Q03113 381 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 ZNF33AQ06730 810 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 PDIA2Q13087 525 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 OLIG2Q13516 323 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 SERINC3Q13530 473 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 SLMAPQ14BN4 828 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 FASTKD3Q14CZ7 662 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 TPSAB1Q15661 275 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 ZNF77Q15935 545 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 HIF1AQ16665 826 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 PARP6Q2NL67 630 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 ANO4Q32M45 955 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 BBS9Q3SYG4 887 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 PARP15Q460N3 678 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 MSS51Q4VC12 460 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 MPPE1Q53F39 396 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 HP1BP3Q5SSJ5 553 aaPredicted RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 FNBP1LQ5T0N5 605 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 C6orf118Q5T5N4 469 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 CFAP58Q5T655 872 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 RNF219Q5W0B1 726 aaPredicted RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 ITPRIPL1Q6GPH6 555 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 CXorf57Q6NSI4 855 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 ANKRD54Q6NXT1 300 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 SYCE2Q6PIF2 218 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 PPP1R21Q6ZMI0 780 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 TPGS1Q6ZTW0 290 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 CENPUQ71F23 418 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 ZNF534Q76KX8 674 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 GPR149Q86SP6 731 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 LRRC49Q8IUZ0 686 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 ANKMY2Q8IV38 441 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 ARID3BQ8IVW6 561 aaPredicted RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 CPXM2Q8N436 756 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.86□□□□□ -1.31
PVT1-217ENST00000523190 CNTD1Q8N815 330 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 UHMK1Q8TAS1 419 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 ZSCAN18Q8TBC5 510 aaPredicted RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 WFDC5Q8TCV5 224 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 DDI1Q8WTU0 396 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 SLC39A7Q92504 469 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 MAML1Q92585 1016 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 PABPC5Q96DU9 382 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 TMA16Q96EY4 203 aaKnown RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 ZNF419Q96HQ0 510 aaPredicted RBP6.86□□□□□ -1.31
PVT1-217ENST00000523190 C9orf72Q96LT7 481 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 TEKT5Q96M29 485 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 SERPINB12Q96P63 405 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 RBM15Q96T37 977 aaKnown RBP eCLIP6.86□□□□□ -1.31
PVT1-217ENST00000523190 VAT1Q99536 393 aa6.86□□□□□ -1.31
PVT1-217ENST00000523190 IL12RB2Q99665 862 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms