RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CHRM3P20309 590 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 KCNA3P22001 575 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MGAT1P26572 445 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 RPA1P27694 616 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ADRA1BP35368 520 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 HNF1BP35680 557 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 GATMP50440 423 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MXI1P50539 228 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 STAT5BP51692 787 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 DGKEP52429 567 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 EPHB4P54760 987 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 LILRA4P59901 499 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 RAP2BP61225 183 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 STX1BP61266 288 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MECOMQ03112 1051 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 DEUP1Q05D60 604 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 IKQ13123 557 aaPredicted RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 GRAPQ13588 217 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 TRA2AQ13595 282 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZNF273Q14593 569 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ACAP1Q15027 740 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 PCOLCEQ15113 449 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 GEN1Q17RS7 908 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 AAK1Q2M2I8 961 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 C15orf59Q2T9L4 293 aaPredicted RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 BOLA3Q53S33 107 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZNF667Q5HYK9 610 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 SH2D4BQ5SQS7 431 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 C10orf76Q5T2E6 689 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ARHGAP40Q5TG30 622 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLC25A24Q6NUK1 477 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMEM81Q6P7N7 255 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLC30A10Q6XR72 485 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 RBPMS2Q6ZRY4 209 aaKnown RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 CXXC5Q7LFL8 322 aaKnown RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 FRMD5Q7Z6J6 570 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM83AQ86UY5 434 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMEM200AQ86VY9 491 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 IGDCC3Q8IVU1 814 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM126BQ8IXS8 530 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 OR4N4Q8N0Y3 316 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ARMC10Q8N2F6 343 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 FBXW8Q8N3Y1 598 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 FBXL6Q8N531 539 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 STPG3Q8N7X2 389 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MRPL43Q8N983 215 aaKnown RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ATAD1Q8NBU5 361 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 FBXO15Q8NCQ5 510 aaPredicted RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MCUQ8NE86 351 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MAFAQ8NHW3 353 aaPredicted RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 PSMA8Q8TAA3 256 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 SUN3Q8TAQ9 357 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLC2A12Q8TD20 617 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMEM171Q8WVE6 324 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 CNOT9Q92600 299 aaKnown RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 KCNJ9Q92806 393 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 HDAC11Q96DB2 347 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZNF668Q96K58 619 aaPredicted RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 GAL3ST4Q96RP7 486 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MLPHQ9BV36 600 aaPredicted RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 KIFC3Q9BVG8 833 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 STRA6Q9BX79 667 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 PLVAPQ9BX97 442 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MRPL1Q9BYD6 325 aaKnown RBP4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 TRIM31Q9BZY9 425 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 TRIM7Q9C029 511 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 NYXQ9GZU5 481 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 ADAMTS10Q9H324 1103 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 BCAS3Q9H6U6 928 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 NRDE2Q9H7Z3 1164 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 DNAJC18Q9H819 358 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 MMRN2Q9H8L6 949 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 RRAGCQ9HB90 399 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 PDE11AQ9HCR9 933 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 FBXO28Q9NVF7 368 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 HSPBP1Q9NZL4 362 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 AIPL1Q9NZN9 384 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 CNIH4Q9P003 139 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 Q9UFV3 132 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 VPS51Q9UID3 782 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 WDR37Q9Y2I8 494 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 NFS1Q9Y697 457 aa4.1□□□□□ -1.75
RNU4-60P-201ENST00000517239 LOC100509620A0A075B734 347 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZSCAN5CA6NGD5 496 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 MBD3L5A6NJ08 208 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 LRRC53A6NM62 1247 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ENO4A6NNW6 628 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 C11orf95C9JLR9 678 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 E9PLN8 166 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 H0YCG3 227 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 AGPSO00116 658 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLC33A1O00400 549 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CD3EAPO15446 510 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CTIFO43310 598 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 SPRY1O43609 319 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PAGE4O60829 102 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 AVILO75366 819 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TACC1O75410 805 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 DDHD2O94830 711 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 HAUS5O94927 633 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms