RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ZNF582Q96NG8 517 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PUS7Q96PZ0 661 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ELF4Q99607 663 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DUSP9Q99956 384 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ORAI3Q9BRQ5 295 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CNPPD1Q9BV87 410 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 MAGEH1Q9H213 219 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LDAHQ9H6V9 325 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PLEKHA3Q9HB20 300 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LRRC4Q9HBW1 653 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NECAP2Q9NVZ3 263 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SMARCAL1Q9NZC9 954 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LRFN1Q9P244 771 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RPS6KB2Q9UBS0 482 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PPP1R1BQ9UD71 204 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IPO11Q9UI26 975 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TMPRSS11EQ9UL52 423 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 VDAC3Q9Y277 283 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC45A1Q9Y2W3 748 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 COQ6Q9Y2Z9 468 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RAI2Q9Y5P3 530 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CDY2AQ9Y6F7 541 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CACNA1GO43497 2377 aa-0.64□□□□□ -2.51
RNU6-1238P-201ENST00000517215 A0A0J9YXV3 536 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 A0A0U1RQK1 487 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LOC101059948A0A1B0GTJ6 334 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LOC105378220A0A1B0GUY1 285 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ARHGAP10A1A4S6 786 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ASPDHA6ND91 283 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLCO1B7G3V0H7 640 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 F2RL2O00254 374 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SOCS3O14543 225 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PER2O15055 1255 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GRM6O15303 877 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DIAPH1O60610 1272 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZNF324O75467 553 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ENDOD1O94919 500 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NPTXRO95502 500 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CHEK2O96017 543 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HPRP00739 348 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PRH1P02810 166 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LINC00271P0C7V0 271 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IGHV4-30-4P0DP06 118 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NR2C1P13056 603 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CHRM3P20309 590 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RBMS1P29558 406 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 OAS2P29728 719 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IDUAP35475 653 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 MAP2K2P36507 400 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IL15P40933 162 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SOX3P41225 446 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC6A12P48065 614 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SOX2P48431 317 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CPT1AP50416 773 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 MXI1P50539 228 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PDE6CP51160 858 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LOXL3P58215 753 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 B3GALT5-AS1P59052 145 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RPP30P78346 268 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ATP8B2P98198 1209 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ECT2LQ008S8 904 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 FLIIQ13045 1269 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ITGADQ13349 1161 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 HSP90AA2PQ14568 343 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZNF284Q2VY69 593 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC10A6Q3KNW5 377 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TMEM177Q53S58 311 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 WDR38Q5JTN6 314 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ARHGAP40Q5TG30 622 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 BHLHB9Q6PI77 547 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 FAM180AQ6UWF9 173 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LRIG3Q6UXM1 1119 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NSMFQ6X4W1 530 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CCDC81Q6ZN84 652 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 Q6ZSA8 131 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RBFAQ8N0V3 343 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LSMEM2Q8N112 164 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SCML4Q8N228 414 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 AOPEPQ8N6M6 819 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 C12orf76Q8N812 135 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 DCBLD1Q8N8Z6 715 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IL17RDQ8NFM7 739 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PHOSPHO2Q8TCD6 241 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 MRGPRDQ8TDS7 321 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ARNTL2Q8WYA1 636 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 RTF1Q92541 710 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KAT2AQ92830 837 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KAT2BQ92831 832 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SEMA4DQ92854 862 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TXNDC15Q96J42 360 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 CFAP57Q96MR6 1250 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 OR1F2PQ96R84 312 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 GAL3ST4Q96RP7 486 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SPON2Q9BUD6 331 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PTDSS2Q9BVG9 487 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 C1orf43Q9BWL3 253 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PACSIN1Q9BY11 444 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 POLDIP3Q9BY77 421 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZMAT4Q9H898 229 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms