RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 LPIN1Q14693 890 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 IFI16Q16666 785 aaKnown RBP7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 ZNF697Q5TEC3 545 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 PRAMEF20Q5VT98 475 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 THSD4Q6ZMP0 1018 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 ZNF813Q6ZN06 617 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 ZNF704Q6ZNC4 412 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 CHST9Q7L1S5 443 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 ZNF598Q86UK7 904 aaKnown RBP7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 LSMEM2Q8N112 164 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 SMYD1Q8NB12 490 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 C3orf20Q8ND61 904 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 CFHR4Q92496 578 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 KAT2AQ92830 837 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 PGM2Q96G03 612 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 MRGPRX1Q96LB2 322 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 PLIN2Q99541 437 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 POP1Q99575 1024 aaKnown RBP7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 WDR11Q9BZH6 1224 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 RMND5AQ9H871 391 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 GPRC5CQ9NQ84 441 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 TRPS1Q9UHF7 1281 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 PCDHA6Q9UN73 950 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 AP4E1Q9UPM8 1137 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 DISP3Q9P2K9 1392 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 KIAA1107Q9UPP5 1409 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 TRBC2A0A5B9 178 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 CTDSP2O14595 271 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 KCNK3O14649 394 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 MFN2O95140 757 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GDF11O95390 407 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PENKP01210 267 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 IGHEP01854 428 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 KLKB1P03952 638 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 ERVK-10P10266 1014 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 EPORP19235 508 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PCGF2P35227 344 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 POU3F4P49335 361 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 ARSEP51690 589 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 STX1BP61266 288 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GCNT1Q02742 428 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PCDH1Q08174 1060 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PPIL2Q13356 520 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GPR162Q16538 588 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 HERC4Q5GLZ8 1057 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 C10orf120Q5SQS8 335 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 SPATA46Q5T0L3 261 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 TMTC4Q5T4D3 741 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 TTC22Q5TAA0 569 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 THEMIS2Q5TEJ8 643 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 ANO7Q6IWH7 933 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GPR153Q6NV75 609 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 SYT13Q7L8C5 426 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 HDXQ7Z353 690 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 KBTBD6Q86V97 674 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 KDM8Q8N371 416 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 VGLL2Q8N8G2 317 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 IL17RCQ8NAC3 791 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GLMPQ8WWB7 406 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 MAIP1Q8WWC4 291 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PIBF1Q8WXW3 757 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 STARD8Q92502 1023 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 DGAT2Q96PD7 388 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 THAP2Q9H0W7 228 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 UPF2Q9HAU5 1272 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 FAM212BQ9NTI7 297 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 CATSPERZQ9NTU4 200 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 ZDHHC3Q9NYG2 299 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 LIMA1Q9UHB6 759 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 TMEFF2Q9UIK5 374 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 KCND3Q9UK17 655 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GABRQQ9UN88 632 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 STRAPQ9Y3F4 350 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PCDHA10Q9Y5I2 948 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 CFAP20Q9Y6A4 193 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 SBNO1A3KN83 1393 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 MBD5Q9P267 1494 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 SPATA31A3Q5VYP0 1347 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PRAMEF27A3QJZ7 478 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GOLGA8OA6NCC3 632 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 ZNF716A6NP11 495 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 AHRRA9YTQ3 701 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GOLGA8NF8WBI6 632 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GOLGA8MH3BSY2 632 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 CBR3O75828 277 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 SPDEFO95238 335 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 CSTAP01040 98 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 ZNF735P0CB33 412 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 CLUP10909 449 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 RALBP11234 206 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 TYRP14679 529 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PECAM1P16284 738 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 AGAP20933 346 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 PTPN6P29350 595 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 GFPT1Q06210 699 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 SCRN1Q12765 414 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 OVGP1Q12889 678 aa7.68□□□□□ -1.18
PDGFRA-206ENST00000508170 LCP2Q13094 533 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms