RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ATXN7L3BQ96GX2 97 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 INTS4Q96HW7 963 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 NOX5Q96PH1 765 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 IRX2Q9BZI1 471 aaPredicted RBP7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 FAM117AQ9C073 453 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 ST7Q9NRC1 585 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 EVA1BQ9NVM1 165 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 KLHL11Q9NVR0 708 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 DNAJC28Q9NX36 388 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 SLC25A13Q9UJS0 675 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 NAALADL1Q9UQQ1 740 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 TLR6Q9Y2C9 796 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 PCDHB4Q9Y5E5 795 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 TDRD6O60522 2096 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 DOCK9Q9BZ29 2069 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 SYNJ2BP-COX16A0A087WUM0 186 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 A0A1B0GVL5 298 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 K7ENP7 123 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 K7ESM1 405 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 KPNA3O00505 521 aaPredicted RBP7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 STX10O60499 249 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 PCDH8O95206 1070 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 GIMD1P0DJR0 217 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 PFKFB1P16118 471 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 TGM2P21980 687 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 AKT2P31751 481 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 NUDT1P36639 197 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 GGCXP38435 758 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 DUSP3P51452 185 aaPredicted RBP7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 CENPCQ03188 943 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 DRAP1Q14919 205 aaPredicted RBP7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 DLG2Q15700 870 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 NFIL3Q16649 462 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 ZC3H12AQ5D1E8 599 aaKnown RBP7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 GUSBP11Q6P575 273 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 INO80CQ6PI98 192 aaPredicted RBP7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 LCLAT1Q6UWP7 414 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 EFL1Q7Z2Z2 1120 aaKnown RBP7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 SMYD4Q8IYR2 804 aaPredicted RBP7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 CCAR2Q8N163 923 aaKnown RBP7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 SCML4Q8N228 414 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 TMEM145Q8NBT3 493 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 FRS2Q8WU20 508 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 SLC35F5Q8WV83 523 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 RNF34Q969K3 372 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 AZIN2Q96A70 460 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 FAXDC2Q96IV6 333 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 DPH1Q9BZG8 443 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 KDM4CQ9H3R0 1056 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 PREBQ9HCU5 417 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 DYRK4Q9NR20 520 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 NLGN3Q9NZ94 848 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 COX16Q9P0S2 106 aa7.09□□□□□ -1.27
NPIPB3-203ENST00000504841 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 LY6G6EA0A0G2JKS1 128 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 A0A1W2PNU3 283 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 NEMP2A6NFY4 417 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 A6NNZ2 444 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 K7ELQ4 463 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 AGRPO00253 132 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 MUSKO15146 869 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 CETN3O15182 167 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 FBXO21O94952 628 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 RHOBTB3O94955 611 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 TNFSF15O95150 251 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 F13A1P00488 732 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 FYNP06241 537 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 GP1BAP07359 652 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ZSCAN22P10073 491 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 HNRNPA2B1P22626 353 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 TBXAS1P24557 533 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 CSRP3P50461 194 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 IRAK1P51617 712 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 TAS2R38P59533 333 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 PITX1P78337 314 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 DNM1Q05193 864 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 SULT2A1Q06520 285 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ENPEPQ07075 957 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ZNF177Q13360 481 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ZNF284Q2VY69 593 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 DEFB133Q30KQ1 61 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ZCWPW2Q504Y3 356 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 PIP5KL1Q5T9C9 394 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 SYPL2Q5VXT5 272 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 SEL1L3Q68CR1 1132 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 CXorf57Q6NSI4 855 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 GCNT7Q6ZNI0 430 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 RBM44Q6ZP01 1051 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 Q6ZSR6 202 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 HORMAD1Q86X24 394 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC22A18ASQ8N1D0 253 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 GUF1Q8N442 669 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ATP6V0D2Q8N8Y2 350 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ZNF548Q8NEK5 533 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 OR52K2Q8NGK3 314 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 GRIN3AQ8TCU5 1115 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ERCC4Q92889 916 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 KAT5Q92993 513 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ZDHHC16Q969W1 377 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 FAM131CQ96AQ9 280 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms