RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PRKD1Q15139 912 aaPredicted RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 SLC45A4Q5BKX6 768 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 ASTLQ6HA08 431 aaPredicted RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 C12orf40Q86WS4 652 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 PLPP6Q8IY26 295 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 ATPAF2Q8N5M1 289 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 ST13P5Q8NFI4 369 aaPredicted RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 MAML1Q92585 1016 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 ISG20Q96AZ6 181 aaKnown RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 HMCESQ96FZ2 354 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 PDFQ9HBH1 243 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 ATP13A1Q9HD20 1204 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 HEBP1Q9NRV9 189 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 ELOVL2Q9NXB9 296 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 IPO11Q9UI26 975 aaKnown RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 HEY1Q9Y5J3 304 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 MRFAP1Q9Y605 127 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 XIRP2A4UGR9 3374 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 TICRRQ7Z2Z1 1910 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 A0A0D9SEW6 157 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 MATN3O15232 486 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 ITGAVP06756 1048 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 DLDP09622 509 aaKnown RBP20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 HNRNPLP14866 589 aaKnown RBP eCLIP20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 MZF1P28698 734 aaPredicted RBP20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 FNTAP49354 379 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 GALK1P51570 392 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 GRSF1Q12849 480 aaKnown RBP eCLIP20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 MBLAC2Q68D91 279 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 ZNF852Q6ZMS4 543 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 CDKL3Q8IVW4 592 aaPredicted RBP20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 NAT16Q8N8M0 369 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 TFB1MQ8WVM0 346 aaKnown RBP20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 BHMTQ93088 406 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 QKIQ96PU8 341 aaKnown RBP eCLIP20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 CEP44Q9C0F1 390 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 ARHGEF3Q9NR81 526 aa20.17■□□□□ 0.82
SCAMP3-209ENST00000497470 NUP205Q92621 2012 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 SHISA7A6NL88 538 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 ZNF185O15231 689 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 LIASO43766 372 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 URI1O94763 535 aaPredicted RBP20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 RBP3P10745 1247 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 PECAM1P16284 738 aaPredicted RBP20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 CHRNA3P32297 505 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 HSPA9P38646 679 aaKnown RBP20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 SLC6A11P48066 632 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 RENBPP51606 427 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 DYNLT1P63172 113 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 IFI35P80217 286 aaPredicted RBP20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 ECT2LQ008S8 904 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 ENPP2Q13822 863 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 OASLQ15646 514 aaKnown RBP20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 GEN1Q17RS7 908 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 DGKKQ5KSL6 1271 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 IL31Q6EBC2 164 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 TEX26Q8N6G2 289 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 PRELID2Q8N945 189 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 MNS1Q8NEH6 495 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 OR7D4Q8NG98 312 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 NSMCE1Q8WV22 266 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 FAM3CQ92520 227 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 SLCO2A1Q92959 643 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 RTP4Q96DX8 246 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 L2HGDHQ9H9P8 463 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 VPS51Q9UID3 782 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 MFHAS1Q9Y4C4 1052 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 PRUNE2Q8WUY3 3088 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 F5P12259 2224 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 EYSQ5T1H1 3165 aa20.16■□□□□ 0.82
SCAMP3-209ENST00000497470 TCRBV7S2A1N4TA0A589 114 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 TBC1D3BA6NDS4 549 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 KRIT1O00522 736 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 ATP9BO43861 1147 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 CES1P23141 567 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 ACVRL1P37023 503 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 NNMTP40261 264 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 EIF3EP60228 445 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 MRPS21P82921 87 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 BYSLQ13895 437 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 FUT11Q495W5 492 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 RALGPS1Q5JS13 557 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 C4orf22Q6V702 233 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 TRMT11Q7Z4G4 463 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 CCDC13Q8IYE1 715 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 APCDD1Q8J025 514 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 ZNF592Q92610 1267 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 CELF6Q96J87 481 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 MS4A14Q96JA4 679 aa20.15■□□□□ 0.82
SCAMP3-209ENST00000497470 DFFAO00273 331 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 PHF2O75151 1096 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 PEX11BO96011 259 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 C7P10643 843 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 ARF5P84085 180 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 ZXDAP98168 799 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 NSUN2Q08J23 767 aaKnown RBP eCLIP20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 TMEM215Q68D42 235 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 NPNTQ6UXI9 565 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 ZNF687Q8N1G0 1237 aa20.14■□□□□ 0.81
SCAMP3-209ENST00000497470 BBS5Q8N3I7 341 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms