RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 TGM2P21980 687 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 SERPINB6P35237 376 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 GARSP41250 739 aaKnown RBP13.8□□□□□ -0.2
PTPN7-218ENST00000496197 KIR2DL1P43626 348 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-218ENST00000496197 YBEYP58557 167 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-218ENST00000496197 SIGLEC14Q08ET2 396 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 SLC12A1Q13621 1099 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 TFDP2Q14188 446 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 PARP15Q460N3 678 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 EGFLAMQ63HQ2 1017 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 PKN3Q6P5Z2 889 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 ZNF852Q6ZMS4 543 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 CCDC117Q8IWD4 279 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-218ENST00000496197 LZTR1Q8N653 840 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 DCAF4L2Q8NA75 395 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 ACTL9Q8TC94 416 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 ATG4AQ8WYN0 398 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 TTC17Q96AE7 1141 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 MSANTD3Q96H12 275 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 PBKQ96KB5 322 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 LGMNQ99538 433 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 CIPCQ9C0C6 399 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 TBC1D17Q9HA65 648 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 LTB4R2Q9NPC1 389 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 ELOVL2Q9NXB9 296 aa13.8□□□□□ -0.2
PTPN7-218ENST00000496197 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 ESPNB1AK53 854 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 WASH3PC4AMC7 463 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 PDE2AO00408 941 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-218ENST00000496197 KDELR3O43731 214 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 TJP3O95049 919 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 PEX11BO96011 259 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 CHRNB1P11230 501 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 VAV1P15498 845 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 PRLRP16471 622 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 NOMO1Q15155 1222 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 CWF19L1Q69YN2 538 aaKnown RBP13.79□□□□□ -0.2
PTPN7-218ENST00000496197 Q6ZS52 159 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 ZC3H18Q86VM9 953 aaKnown RBP13.79□□□□□ -0.2
PTPN7-218ENST00000496197 CREG2Q8IUH2 290 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 ZNF557Q8N988 423 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-218ENST00000496197 WFIKKN2Q8TEU8 576 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 CAPZA3Q96KX2 299 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 MTG2Q9H4K7 406 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-218ENST00000496197 SLCO3A1Q9UIG8 710 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 SAR1BQ9Y6B6 198 aa13.79□□□□□ -0.2
PTPN7-218ENST00000496197 A0A0C4DFX4 3053 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ARHGAP42A6NI28 874 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 CES2O00748 559 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 MAN2B1O00754 1011 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 SMAD6O43541 496 aaKnown RBP13.78□□□□□ -0.2
PTPN7-218ENST00000496197 PRAMEF11O60813 436 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 RNF40O75150 1001 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ZFXP17010 805 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-218ENST00000496197 TCP1P17987 556 aaKnown RBP13.78□□□□□ -0.2
PTPN7-218ENST00000496197 POLR2EP19388 210 aaKnown RBP13.78□□□□□ -0.2
PTPN7-218ENST00000496197 DRD1P21728 446 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 TIE1P35590 1138 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 NRLP54845 237 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 OXCT1P55809 520 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 GRSF1Q12849 480 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPN7-218ENST00000496197 DMC1Q14565 340 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ZNF234Q14588 700 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 UBXN2BQ14CS0 331 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 TRIM67Q6ZTA4 783 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ZNF354CQ86Y25 554 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 SUGP1Q8IWZ8 645 aaKnown RBP13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ZNF366Q8N895 744 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 C1orf54Q8WWF1 131 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ZNF592Q92610 1267 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 P3H4Q92791 437 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 HDAC11Q96DB2 347 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ERLEC1Q96DZ1 483 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 IPO11Q9UI26 975 aaKnown RBP13.78□□□□□ -0.2
PTPN7-218ENST00000496197 TTC7AQ9ULT0 858 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ERVW-1Q9UQF0 538 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 STARD13Q9Y3M8 1113 aa13.78□□□□□ -0.2
PTPN7-218ENST00000496197 ZNF500O60304 480 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-218ENST00000496197 ZNF821O75541 412 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-218ENST00000496197 DLDP09622 509 aaKnown RBP13.77□□□□□ -0.21
PTPN7-218ENST00000496197 SRCP12931 536 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 CETN2P41208 172 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 IL12RB1P42701 662 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 TNFRSF4P43489 277 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 ECT2LQ008S8 904 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 PPIDQ08752 370 aaKnown RBP13.77□□□□□ -0.21
PTPN7-218ENST00000496197 GAS6Q14393 721 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 EIF4HQ15056 248 aaKnown RBP13.77□□□□□ -0.21
PTPN7-218ENST00000496197 LONRF2Q1L5Z9 754 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 C2orf27AQ580R0 203 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 ATPAF2Q8N5M1 289 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 ZNF513Q8N8E2 541 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-218ENST00000496197 PJA1Q8NG27 643 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 ACTRT1Q8TDG2 376 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 C2orf49Q9BVC5 232 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-218ENST00000496197 COL25A1Q9BXS0 654 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-218ENST00000496197 AP1M1Q9BXS5 423 aa13.77□□□□□ -0.21
PTPN7-218ENST00000496197 PRDM16Q9HAZ2 1276 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms