RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 USP13Q92995 863 aaPredicted RBP7.07□□□□□ -1.28
PDAP1-203ENST00000488214 EXOC4Q96A65 974 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 AGAP3Q96P47 875 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 RBM15Q96T37 977 aaKnown RBP eCLIP7.07□□□□□ -1.28
PDAP1-203ENST00000488214 VAT1Q99536 393 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 MUC3BQ9H195 1237 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 CDC42EP4Q9H3Q1 356 aaKnown RBP7.07□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF576Q9H609 170 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 ETNK1Q9HBU6 452 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 ATP13A1Q9HD20 1204 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 STOML2Q9UJZ1 356 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF510Q9Y2H8 683 aa7.07□□□□□ -1.28
PDAP1-203ENST00000488214 PRRC2BQ5JSZ5 2229 aaKnown RBP7.07□□□□□ -1.28
PDAP1-203ENST00000488214 TICRRQ7Z2Z1 1910 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 A0A0D9SEW6 157 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 J3KR12 359 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 SMAPO00193 183 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 MAP2K7O14733 419 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 MATN3O15232 486 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZBTB24O43167 697 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 MAFKO60675 156 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ACSL3O95573 720 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CYBBP04839 570 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CCNB1P14635 433 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 FSHRP23945 695 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CCNCP24863 283 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 HOXD9P28356 352 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CD68P34810 354 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ETFBP38117 255 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 MMP13P45452 471 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 YBEYP58557 167 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF33AQ06730 810 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 PDIA2Q13087 525 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 SERINC3Q13530 473 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 PRPSAP1Q14558 356 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF235Q14590 738 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CBX2Q14781 532 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 FASTKD3Q14CZ7 662 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 BBS9Q3SYG4 887 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 TEX44Q53QW1 395 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 HP1BP3Q5SSJ5 553 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 UBAP2Q5T6F2 1119 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 TMCO4Q5TGY1 634 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CXorf57Q6NSI4 855 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ANKRD54Q6NXT1 300 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 LEKR1Q6ZMV7 388 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 EP400NLQ6ZTU2 488 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 HTR3DQ70Z44 454 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 PID1Q7Z2X4 250 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 MTERF4Q7Z6M4 381 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 SETD3Q86TU7 594 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 LRRC49Q8IUZ0 686 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ANKMY2Q8IV38 441 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CCDC117Q8IWD4 279 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 NPAS3Q8IXF0 933 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 FAM217AQ8IXS0 508 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZBED8Q8IZ13 594 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 PDIK1LQ8N165 341 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 MICALL1Q8N3F8 863 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CPXM2Q8N436 756 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 EFHBQ8N7U6 833 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 OR52K2Q8NGK3 314 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 UHMK1Q8TAS1 419 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 RIN3Q8TB24 985 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZSCAN18Q8TBC5 510 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 WFDC5Q8TCV5 224 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ARHGEF2Q92974 986 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF419Q96HQ0 510 aaPredicted RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 C9orf72Q96LT7 481 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZSWIM3Q96MP5 696 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 SERPINB12Q96P63 405 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZIM3Q96PE6 472 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 TSGA13Q96PP4 275 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 GORASP1Q9BQQ3 440 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 SPON2Q9BUD6 331 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 TXLNGYQ9BZA5 131 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 FOXP3Q9BZS1 431 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 TSPYL1Q9H0U9 437 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 MAGEH1Q9H213 219 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 VIPAS39Q9H9C1 493 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 KIF9Q9HAQ2 790 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 NT5MQ9NPB1 228 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 EIF2B3Q9NR50 452 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 TDP1Q9NUW8 608 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 RBM22Q9NW64 420 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 PLK2Q9NYY3 685 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 NINJ2Q9NZG7 142 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 IGSF9Q9P2J2 1179 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 ZMYM5Q9UJ78 669 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 TRHDEQ9UKU6 1024 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 CHMP2BQ9UQN3 213 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 PLAAQ9Y263 795 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 WNT6Q9Y6F9 365 aa7.06□□□□□ -1.28
PDAP1-203ENST00000488214 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.06□□□□□ -1.28
PDAP1-203ENST00000488214 MUC22E2RYF6 1773 aaPredicted RBP7.05□□□□□ -1.28
PDAP1-203ENST00000488214 E2F8A0AVK6 867 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 ILVBLA1L0T0 632 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 GOLGA6CA6NDK9 693 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 SOBPA7XYQ1 873 aa7.05□□□□□ -1.28
PDAP1-203ENST00000488214 NEDD8-MDP1E9PL57 170 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms