RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 RASA4BC9J798 803 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 M0QX08 132 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 PDPK1O15530 556 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 FAM189A1O60320 539 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 HUS1O60921 280 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 TADA3O75528 432 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 KAT7O95251 611 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 KLF8O95600 359 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 NFICP08651 508 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 MTHFD1P11586 935 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 USP8P40818 1118 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 EIF2DP41214 584 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 TNFRSF4P43489 277 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 GPR15P49685 360 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 MYL7Q01449 175 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 RPL6Q02878 288 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 ITKQ08881 620 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 ZRSR1Q15695 479 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 PDCD2Q16342 344 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 CCNG2Q16589 344 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 PREPLQ4J6C6 727 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 SGO2Q562F6 1265 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 SDHAF4Q5VUM1 108 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 SLFN12LQ6IEE8 588 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 CRTC1Q6UUV9 634 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 DTHD1Q6ZMT9 781 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 KCNK18Q7Z418 384 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 TRMT11Q7Z4G4 463 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 MYLK4Q86YV6 388 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 SPATA2LQ8IUW3 424 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 CARNMT1Q8N4J0 409 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 ALLCQ8N6M5 410 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 IL17RCQ8NAC3 791 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 GLIS3Q8NEA6 775 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 HMGB4Q8WW32 186 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 HDAC2Q92769 488 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 NINJ1Q92982 152 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 TTC17Q96AE7 1141 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 ZNF560Q96MR9 790 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 SLC22A12Q96S37 553 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 ACBD6Q9BR61 282 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 EHD2Q9NZN4 543 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 GCNT4Q9P109 453 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 SUSD2Q9UGT4 822 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 NOSIPQ9Y314 301 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 SLC30A1Q9Y6M5 507 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 ASPMQ8IZT6 3477 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 HELZP42694 1942 aaKnown RBP7.11□□□□□ -1.27
HDAC3-209ENST00000486618 PLXNB3Q9ULL4 1909 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 ATXN2Q99700 1313 aaKnown RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 GOLGA6L10A0A0M3HER8 536 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 A0A1W2PQD8 194 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 TCRBV21S2A2A0A5A6 115 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 PP2D1A8MPX8 630 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 AKR1B15C9JRZ8 316 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 SGK1O00141 431 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 EIF1AYO14602 144 aaKnown RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 ZNF217O75362 1048 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 MED26O95402 600 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 FTH1P19P0C7X4 201 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 PLA2G4BP0C869 781 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 CD59P13987 128 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 HNRNPLP14866 589 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 GNSP15586 552 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 CYP2F1P24903 491 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 MAP4P27816 1152 aaKnown RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 PCSK1P29120 753 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 GRIA2P42262 883 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 PPP3CCP48454 512 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 ZNF33AQ06730 810 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 CCDC173Q0VFZ6 552 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 RESTQ13127 1097 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 DHCR24Q15392 516 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 ZSCAN26Q16670 478 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 MINDY4Q4G0A6 757 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 CFAP221Q4G0U5 840 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 ZC2HC1CQ53FD0 456 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 NUGGCQ68CJ6 796 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 ADALQ6DHV7 355 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 ITPRIPL1Q6GPH6 555 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 CCNI2Q6ZMN8 369 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 RAPH1Q70E73 1250 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 SCN4BQ8IWT1 228 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 ADGRG2Q8IZP9 1017 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 TMEM86AQ8N2M4 240 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 MYCT1Q8N699 235 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 FRMD1Q8N878 549 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 STKLD1Q8NE28 680 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 FBXO18Q8NFZ0 1043 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 SUN5Q8TC36 379 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 LRRC15Q8TF66 581 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 CPLX3Q8WVH0 158 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 RBM18Q96H35 190 aaKnown RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 FUBP3Q96I24 572 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 CNDP2Q96KP4 475 aaKnown RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 CEP295NLQ96MC4 621 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 TSGA13Q96PP4 275 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms