RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 JCHAINP01591 159 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 ETS1P14921 441 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 VAV1P15498 845 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 HOXD9P28356 352 aaPredicted RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 RPL21P46778 160 aaKnown RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 CARSP49589 748 aaKnown RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 SGSHP51688 502 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 CLCN6P51797 869 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 PLK1P53350 603 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 WASHC5Q12768 1159 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 HLTFQ14527 1009 aaKnown RBP eCLIP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 DMC1Q14565 340 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 RFTN1Q14699 578 aaPredicted RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 MARC1Q5VT66 337 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 FYB2Q5VWT5 728 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 RNF219Q5W0B1 726 aaPredicted RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 TANGO2Q6ICL3 276 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 CXorf57Q6NSI4 855 aaKnown RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 RHBDF2Q6PJF5 856 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 CEP128Q6ZU80 1094 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 B4GALNT4Q76KP1 1039 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 TMEM25Q86YD3 366 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 NETO2Q8NC67 525 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 DEPDC1BQ8WUY9 529 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 MAML1Q92585 1016 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 ATP2A3Q93084 1043 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 TEKT5Q96M29 485 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 XPO6Q96QU8 1125 aaKnown RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 CDX2Q99626 313 aaPredicted RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 IL12RB2Q99665 862 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 HINFPQ9BQA5 517 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 SPON2Q9BUD6 331 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 BBS2Q9BXC9 721 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 ACE2Q9BYF1 805 aaPredicted RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 POMKQ9H5K3 350 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 ATP13A1Q9HD20 1204 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 EPS15L1Q9UBC2 864 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 WNT6Q9Y6F9 365 aa13.55□□□□□ -0.24
VTI1BP1-201ENST00000486325 ESYT3A0FGR9 886 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 GOLGA6CA6NDK9 693 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 GOLGA6BA6NDN3 693 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 KCNK1O00180 336 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 PSMD3O43242 534 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 ECI2O75521 394 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 ZSCAN5DPP0CG00 497 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 GOLGA6DP0CG33 693 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 PSMC3P17980 439 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 PTPN3P26045 913 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 VPS41P49754 854 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 PLTPP55058 493 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 GEMIN4P57678 1058 aaKnown RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 VSNL1P62760 191 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 CDK16Q00536 496 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 SLC20A2Q08357 652 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 FCHO2Q0JRZ9 810 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 PRPSAP1Q14558 356 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 MORF4L2Q15014 288 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 DHCR24Q15392 516 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 EML3Q32P44 896 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 LY6G5CQ5SRR4 150 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 IZUMO3Q5VZ72 239 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 METTL3Q86U44 580 aaKnown RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 HOOK3Q86VS8 718 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 PPIL6Q8IXY8 311 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 ZNF567Q8N184 647 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 GLIS1Q8NBF1 620 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 RIN3Q8TB24 985 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 CCDC110Q8TBZ0 833 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 HNRNPLLQ8WVV9 542 aaKnown RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 MYLIPQ8WY64 445 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 ART4Q93070 314 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 ACDQ96AP0 544 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 RSPRY1Q96DX4 576 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 LRRC3BQ96PB8 259 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 FEM1AQ9BSK4 669 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 C2orf49Q9BVC5 232 aaPredicted RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 FRMD8Q9BZ67 464 aaPredicted RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 UBE2ZQ9H832 354 aaPredicted RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 RBM22Q9NW64 420 aaKnown RBP eCLIP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 GOLGA6AQ9NYA3 693 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 KLHL8Q9P2G9 620 aaPredicted RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 IGSF9Q9P2J2 1179 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 VPS28Q9UK41 221 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 NFU1Q9UMS0 254 aa13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 USP15Q9Y4E8 981 aaPredicted RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 NUP210Q8TEM1 1887 aaPredicted RBP13.54□□□□□ -0.24
VTI1BP1-201ENST00000486325 A0A0D9SEW6 157 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 ERI2A8K979 691 aaKnown RBP13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 NEDD8-MDP1E9PL57 170 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 CHADO15335 359 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 HOXC11O43248 304 aaPredicted RBP13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 TYRP14679 529 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 CES1P23141 567 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 FCARP24071 287 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 ACVRL1P37023 503 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 ITGA8P53708 1063 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 SARNPP82979 210 aaKnown RBP13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 SULT2A1Q06520 285 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms