RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 C12orf29Q8N999 325 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 FAM181AQ8N9Y4 354 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 PCDH19Q8TAB3 1148 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 SLC2A14Q8TDB8 520 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 ACMSDQ8TDX5 336 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 DENND1AQ8TEH3 1009 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 TFB1MQ8WVM0 346 aaKnown RBP6.28□□□□□ -1.4
CMSS1-203ENST00000478909 SLC44A1Q8WWI5 657 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 CCT6BQ92526 530 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 CDKL2Q92772 493 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 ZNF668Q96K58 619 aaPredicted RBP6.28□□□□□ -1.4
CMSS1-203ENST00000478909 C9orf72Q96LT7 481 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 SPATA13Q96N96 652 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 CSPG4P5Q96PW8 444 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 TGS1Q96RS0 853 aaKnown RBP6.28□□□□□ -1.4
CMSS1-203ENST00000478909 NPY6RQ99463 290 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 PAFAH2Q99487 392 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 PRMT1Q99873 361 aaKnown RBP6.28□□□□□ -1.4
CMSS1-203ENST00000478909 ACBD6Q9BR61 282 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 TUBB6Q9BUF5 446 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 C12orf49Q9H741 205 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 USP29Q9HBJ7 922 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 CSNK1G1Q9HCP0 422 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 KCNK9Q9NPC2 374 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 CPA4Q9UI42 421 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 TRHDEQ9UKU6 1024 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 RPL26L1Q9UNX3 145 aaKnown RBP6.28□□□□□ -1.4
CMSS1-203ENST00000478909 SLC12A4Q9UP95 1085 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 GINS2Q9Y248 185 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 U3KQE9 123 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 DOCK3Q8IZD9 2030 aa6.28□□□□□ -1.4
CMSS1-203ENST00000478909 TSC2P49815 1807 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 PATJQ8NI35 1801 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 A0A0U1RQF3 1178 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TCRBV9S1A1TA0A576 114 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 MAGEB16A2A368 324 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 SMIM23A6NLE4 172 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TMEM189-UBE2V1I3L0A0 370 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 KCNN4O15554 427 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 PSMD3O43242 534 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TYROBPO43914 113 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 CSDE1O75534 798 aaKnown RBP6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TMEM63AO94886 807 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TGDSO95455 350 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 CELA3AP09093 270 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 CD48P09326 243 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 C6orf222P0C671 652 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-203ENST00000478909 USP17L7P0C7H9 530 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 CA4P22748 312 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 NTF4P34130 210 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 HADHAP40939 763 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 RASSF2P50749 326 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 COG7P83436 770 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 RING1Q06587 406 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 IFT88Q13099 833 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 PAFAH1B3Q15102 231 aaKnown RBP6.27□□□□□ -1.41
CMSS1-203ENST00000478909 PRKD1Q15139 912 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-203ENST00000478909 PARP6Q2NL67 630 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 HHATQ5VTY9 493 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 CST9Q5W186 159 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 STEAP4Q687X5 459 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 SCARA3Q6AZY7 606 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 ITPRIPL1Q6GPH6 555 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TRNP1Q6NT89 227 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 SCYL2Q6P3W7 929 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 ZNF574Q6ZN55 896 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-203ENST00000478909 C4orf50Q6ZRC1 276 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 SPATA21Q7Z572 469 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 SPRED2Q7Z698 418 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 PIGZQ86VD9 579 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 FAM228AQ86W67 206 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 UNC45BQ8IWX7 931 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 LRRC34Q8IZ02 419 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 LZTR1Q8N653 840 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 GLIS1Q8NBF1 620 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 AGBL5Q8NDL9 886 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 FBXO36Q8NEA4 188 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 CFAP61Q8NHU2 1237 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 GSDMBQ8TAX9 411 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 MDM1Q8TC05 714 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 MAGEC3Q8TD91 643 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 LRRC8CQ8TDW0 803 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TMEM40Q8WWA1 233 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 HTR3CQ8WXA8 447 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 ATP2A3Q93084 1043 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TTC17Q96AE7 1141 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 ZBTB10Q96DT7 871 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 APOPT1Q96IL0 206 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 CEP295NLQ96MC4 621 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 SYT15Q9BQS2 421 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TACO1Q9BSH4 297 aaKnown RBP6.27□□□□□ -1.41
CMSS1-203ENST00000478909 IQCGQ9H095 443 aaKnown RBP6.27□□□□□ -1.41
CMSS1-203ENST00000478909 FAM96AQ9H5X1 160 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 RETREG1Q9H6L5 497 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 RXFP1Q9HBX9 757 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 DMAP1Q9NPF5 467 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-203ENST00000478909 TXLNGQ9NUQ3 528 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 FAM49BQ9NUQ9 324 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 ETNK2Q9NVF9 386 aa6.27□□□□□ -1.41
CMSS1-203ENST00000478909 NSMCE4AQ9NXX6 385 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms