RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SUSD6Q92537 303 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 NDRG1Q92597 394 aaKnown RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 HSPH1Q92598 858 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 MRPS31Q92665 395 aaKnown RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 ATOH1Q92858 354 aaPredicted RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 HAPLN3Q96S86 360 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 SNRNP25Q9BV90 132 aaKnown RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 NACA2Q9H009 215 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 DHX35Q9H5Z1 703 aaKnown RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 PIGVQ9NUD9 493 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 ZDHHC7Q9NXF8 308 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 MARCH2Q9P0N8 246 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 DCTN4Q9UJW0 460 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 FZD10Q9ULW2 581 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 hCG_1818297A0A087WSY0 165 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 SYNJ2BP-COX16A0A087WUM0 186 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 A0A1W2PP55 124 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 TARSL2A2RTX5 802 aaKnown RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 ZNF840PA6NDX5 716 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 HIDE1A8MVS5 230 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 NDC80O14777 642 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 CTIFO43310 598 aaKnown RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 CLASP2O75122 1294 aaKnown RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 CPNE3O75131 537 aaKnown RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 PHF2O75151 1096 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 GAS8O95995 478 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 TGM2P21980 687 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 MAPK1P28482 360 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 L1CAMP32004 1257 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 NBL1P41271 181 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 FNTAP49354 379 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 HARS2P49590 506 aaKnown RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 ARSEP51690 589 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 CDR1P51861 262 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 TBX4P57082 545 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 CCNG2Q16589 344 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 CYP1B1Q16678 543 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 ARHGAP15Q53QZ3 475 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 PPP6R3Q5H9R7 873 aaPredicted RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 KCNT1Q5JUK3 1230 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 TEX35Q5T0J7 233 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 DAB2IPQ5VWQ8 1189 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 C8orf74Q6P047 294 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 DRICH1Q6PGQ1 229 aaPredicted RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 MFSD7Q6UXD7 560 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 SYDE1Q6ZW31 735 aaPredicted RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 FAM131BQ86XD5 332 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 CPNE8Q86YQ8 564 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 C12orf50Q8NA57 414 aaPredicted RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 RAPGEF5Q92565 580 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 AZIN2Q96A70 460 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 HAUS1Q96CS2 278 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 FAF2Q96CS3 445 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 MS4A14Q96JA4 679 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 BTN2A3PQ96KV6 586 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 C1orf74Q96LT6 269 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 RNF157Q96PX1 679 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 PEBP4Q96S96 227 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 DDX50Q9BQ39 737 aaKnown RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 FERMT1Q9BQL6 677 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 PHF7Q9BWX1 381 aaPredicted RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 IRF2BPLQ9H1B7 796 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 OSBPL2Q9H1P3 480 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 RETREG1Q9H6L5 497 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 LRRC19Q9H756 370 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 TLE6Q9H808 572 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 NMUR1Q9HB89 426 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 PCDH18Q9HCL0 1135 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 WDR6Q9NNW5 1121 aaKnown RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 MAN1C1Q9NR34 630 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 ASAH2Q9NR71 780 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 ARHGEF38Q9NXL2 777 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 COX16Q9P0S2 106 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 RASAL2Q9UJF2 1139 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 USP15Q9Y4E8 981 aaPredicted RBP6.84□□□□□ -1.31
VAMP3-202ENST00000470357 RAD54BQ9Y620 910 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 CACNA1BQ00975 2339 aa6.84□□□□□ -1.31
VAMP3-202ENST00000470357 FRYLO94915 3013 aa6.84□□□□□ -1.32
VAMP3-202ENST00000470357 NUP205Q92621 2012 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 C3orf70A6NLC5 250 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 METTL12A8MUP2 240 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 APOC4-APOC2K7ER74 178 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 EEF2KO00418 725 aaKnown RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 EIF1AYO14602 144 aaKnown RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 ZNF197O14709 1029 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 APOL1O14791 398 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 MCF2LO15068 1137 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 NCAM2O15394 837 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 FGF10O15520 208 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 DAPK3O43293 454 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 CST8O60676 142 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 LATS1O95835 1130 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 IGLV3-27P01718 113 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 APOC2P02655 101 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 TCF4P15884 667 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 PTPN2P17706 415 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 TFE3P19532 575 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 SERPINB6P35237 376 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms