RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 DICER1Q9UPY3 1922 aaKnown RBP16.67■□□□□ 0.26
SLX4-202ENST00000466154 GABRDO14764 452 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 RPL34P49207 117 aaKnown RBP16.67■□□□□ 0.26
SLX4-202ENST00000466154 MRPS6P82932 125 aaKnown RBP16.67■□□□□ 0.26
SLX4-202ENST00000466154 PURAQ00577 322 aaKnown RBP16.67■□□□□ 0.26
SLX4-202ENST00000466154 GRM3Q14832 879 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 IL31Q6EBC2 164 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 DENND6AQ8IWF6 608 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 KCTD13Q8WZ19 329 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 VPS39Q96JC1 886 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 YIPF3Q9GZM5 350 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 COG4Q9H9E3 785 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 AGO3Q9H9G7 860 aaKnown RBP16.67■□□□□ 0.26
SLX4-202ENST00000466154 SLC38A7Q9NVC3 462 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 FBXO21O94952 628 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 GRIK1P39086 918 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 PRPSAP1Q14558 356 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 CAPRIN2Q6IMN6 1127 aaKnown RBP16.67■□□□□ 0.26
SLX4-202ENST00000466154 GDF6Q6KF10 455 aaPredicted RBP16.67■□□□□ 0.26
SLX4-202ENST00000466154 SLC41A1Q8IVJ1 513 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 SORT1Q99523 831 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 KATNAL1Q9BW62 490 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 EIF2B3Q9NR50 452 aaKnown RBP16.67■□□□□ 0.26
SLX4-202ENST00000466154 MKS1Q9NXB0 559 aa16.67■□□□□ 0.26
SLX4-202ENST00000466154 MAP3K7O43318 606 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 LUC7L3O95232 432 aaKnown RBP16.66■□□□□ 0.26
SLX4-202ENST00000466154 SERPINB6P35237 376 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 ZNF157P51786 506 aaPredicted RBP16.66■□□□□ 0.26
SLX4-202ENST00000466154 COPAP53621 1224 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 NOMO2Q5JPE7 1267 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 ITPRIPL1Q6GPH6 555 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 ACMSDQ8TDX5 336 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 FICDQ9BVA6 458 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 FTHL17Q9BXU8 183 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 NMRAL1Q9HBL8 299 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 ZCWPW2A0A1B0GU75 182 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 PRKCGP05129 697 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 ATP6V1C1P21283 382 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 LRPAP1P30533 357 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 MSX2P35548 267 aaPredicted RBP16.66■□□□□ 0.26
SLX4-202ENST00000466154 MPP1Q00013 466 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 PPIDQ08752 370 aaKnown RBP16.66■□□□□ 0.26
SLX4-202ENST00000466154 PCBP1Q15365 356 aaKnown RBP eCLIP16.66■□□□□ 0.26
SLX4-202ENST00000466154 SLC9B1Q4ZJI4 515 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 ANO7Q6IWH7 933 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 TMEM154Q6P9G4 183 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 AGMOQ6ZNB7 445 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 TFAP2DQ7Z6R9 452 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 GBA3Q9H227 469 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 SOX13Q9UN79 622 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 ITGB1P05556 798 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 CD1EP15812 388 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 MPSTP25325 297 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 PGFP49763 221 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 LIMK2P53671 638 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 XKR4Q5GH76 650 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 RPAINQ86UA6 219 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 METTL23Q86XA0 190 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 DEFB107AQ8IZN7 70 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 TDRD5Q8NAT2 981 aaKnown RBP16.66■□□□□ 0.26
SLX4-202ENST00000466154 GPR152Q8TDT2 470 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 DQX1Q8TE96 717 aaKnown RBP16.66■□□□□ 0.26
SLX4-202ENST00000466154 KCTD4Q8WVF5 259 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 FSD1LQ9BXM9 530 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 NDFIP2Q9NV92 336 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 DLGAP2Q9P1A6 1054 aa16.66■□□□□ 0.26
SLX4-202ENST00000466154 RUVBL2Q9Y230 463 aaKnown RBP16.66■□□□□ 0.26
SLX4-202ENST00000466154 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
SLX4-202ENST00000466154 AIM2O14862 343 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 TM7SF2O76062 418 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 PCSK1P29120 753 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 EPHA3P29320 983 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 LRRC42Q9Y546 428 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 TTC24A2A3L6 582 aaPredicted RBP16.65■□□□□ 0.26
SLX4-202ENST00000466154 CFLARO15519 480 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 UBTFL6P0CB48 400 aaPredicted RBP16.65■□□□□ 0.26
SLX4-202ENST00000466154 CHRNA4P43681 627 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 NAGLUP54802 743 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 DNAL1Q4LDG9 190 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 BTBD8Q5XKL5 378 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 CNTD1Q8N815 330 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 NUF2Q9BZD4 464 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 ABI2Q9NYB9 513 aaPredicted RBP16.65■□□□□ 0.26
SLX4-202ENST00000466154 SLC2A6Q9UGQ3 507 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 GTF2IRD1Q9UHL9 959 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 PPM1HQ9ULR3 514 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 NOD1Q9Y239 953 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 TTC3P53804 2025 aa16.65■□□□□ 0.26
SLX4-202ENST00000466154 CHRNA1P02708 482 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 GRK2P25098 689 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 GCKP35557 465 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 PDCD2Q16342 344 aaPredicted RBP16.64■□□□□ 0.26
SLX4-202ENST00000466154 ZNF280DQ6N043 979 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 LRRTM3Q86VH5 581 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 RNF148Q8N7C7 305 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 MAPK15Q8TD08 544 aa16.64■□□□□ 0.26
SLX4-202ENST00000466154 SREK1Q8WXA9 508 aaKnown RBP16.64■□□□□ 0.26
SLX4-202ENST00000466154 ZNF333Q96JL9 665 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms