RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NAT10Q9H0A0 1025 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 NUCKS1Q9H1E3 243 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 ST7Q9NRC1 585 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 FBXL12Q9NXK8 326 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 ADAMTS1Q9UHI8 967 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 XPO7Q9UIA9 1087 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 SCML1Q9UN30 329 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 NAALADL1Q9UQQ1 740 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 DAAM1Q9Y4D1 1078 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 PTPN13Q12923 2485 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 FAM170AA1A519 330 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 FAM47DPA6NHR8 397 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 TTC34A8MYJ7 566 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 E9PAM4 449 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ENC1O14682 589 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 SART1O43290 800 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 C1QL1O75973 258 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ASLP04424 464 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 CYP1A1P04798 512 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 TPM2P07951 284 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 CDK11BP21127 795 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 EPHA8P29322 1005 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 DRD3P35462 400 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 PBX1P40424 430 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 GABRB2P47870 512 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC11A2P49281 568 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 METAP1P53582 386 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ADPRHP54922 357 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 TBX4P57082 545 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 BPIFB4P59827 614 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 PPP2CBP62714 309 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 PPP2CAP67775 309 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 NNTQ13423 1086 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 INAVAQ3KP66 663 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 MS4A13Q5J8X5 152 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 PITRM1Q5JRX3 1037 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 SFMBT2Q5VUG0 894 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 E4F1Q66K89 784 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ADAT2Q7Z6V5 191 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 TMPRSS12Q86WS5 348 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 MMAAQ8IVH4 418 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 KDM1BQ8NB78 822 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ANKRD20A12PQ8NF67 263 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ZNF397Q8NF99 534 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 NEK11Q8NG66 645 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 OR2T34Q8NGX1 318 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ADAM32Q8TC27 787 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 TSC1Q92574 1164 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 FAM131CQ96AQ9 280 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 FAM149B1Q96BN6 582 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 FAM129BQ96TA1 746 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 NEUROG2Q9H2A3 272 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 POPDC2Q9HBU9 364 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ASNSD1Q9NWL6 643 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 STIM2Q9P246 746 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 SUN2Q9UH99 717 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 FZD4Q9ULV1 537 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 ERVW-1Q9UQF0 538 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 PCDHGA1Q9Y5H4 931 aa8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 TLN1Q9Y490 2541 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-210ENST00000462553 HECTD1Q9ULT8 2610 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 LATO43561 262 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 DFNA5O60443 496 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 DAB1O75553 588 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 RFPL3O75679 317 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 GRAP2O75791 330 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 RNASEH2AO75792 299 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 LUC7L3O95232 432 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 LSM8O95777 96 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 PRB1P04280 392 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 GLI1P08151 1106 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 SRPRAP08240 638 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 VAV1P15498 845 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 ITPKBP27987 946 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 MZF1P28698 734 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 CD38P28907 300 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 KRT9P35527 623 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 STAT1P42224 750 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 PSMD8P48556 350 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 STK19P49842 368 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 CCR5P51681 352 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 C21orf59P57076 290 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 NXPH1P58417 271 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 PTP4A2Q12974 167 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 NR1I3Q14994 352 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 LRRK1Q38SD2 2015 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 C2CD6Q53TS8 623 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 DCAF6Q58WW2 860 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 NAA35Q5VZE5 725 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 OR6B2Q6IFH4 312 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 TRNP1Q6NT89 227 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 FBXL19Q6PCT2 694 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC26A9Q7LBE3 791 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 ZNF677Q86XU0 584 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 SPATS2Q86XZ4 545 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 XYLT1Q86Y38 959 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 UNC45BQ8IWX7 931 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 APCDD1Q8J025 514 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 DEFB106AQ8N104 65 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 CFAP52Q8N1V2 620 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms