RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ZFP69BQ9UJL9 534 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 EXOC6BQ9Y2D4 811 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 NRAPQ86VF7 1730 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 PXDNQ92626 1479 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 METP08581 1390 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PCNTO95613 3336 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 GOLGB1Q14789 3259 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 WDR91A4D1P6 747 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PMS2P1A4D2B8 440 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 ZNF879B4DU55 563 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 K7ESF4 209 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PSMD14O00487 310 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 UBE2CO00762 179 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PER2O15055 1255 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 CASC3O15234 703 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 NCK2O43639 380 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 DLX3O60479 287 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 ERAL1O75616 437 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 IDH1O75874 414 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 FGF18O76093 207 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SEC24DO94855 1032 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 TMCC1O94876 653 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SEC31AO94979 1220 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 GGPS1O95749 300 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PNPP00491 289 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 CFBP00751 764 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 KNG1P01042 644 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 AFPP02771 609 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 CKMP06732 381 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 FGFR1P11362 822 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 RARGP13631 454 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 VEGFAP15692 232 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 FAHP16930 419 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 S100A1P23297 94 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 IL32P24001 234 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 TLX1P31314 330 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 NUP62P37198 522 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 NNMTP40261 264 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PIK3CBP42338 1070 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 ACADSBP45954 432 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 GLRBP48167 497 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 CHAF1BQ13112 559 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 KLF1Q13351 362 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 CASP8Q14790 479 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 LASP1Q14847 261 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 VEPH1Q14D04 833 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 MORF4L2Q15014 288 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 ZRSR1Q15695 479 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 ATP2B3Q16720 1220 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 CCDC153Q494R4 210 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PAN2Q504Q3 1202 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 FAM209BQ5JX69 171 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 TMTC4Q5T4D3 741 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 STXBP5Q5T5C0 1151 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 C1orf185Q5T7R7 199 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 CYP4A22Q5TCH4 519 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SLC25A24Q6NUK1 477 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 JMJD6Q6NYC1 403 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 RSPO2Q6UXX9 243 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 CACNA2D4Q7Z3S7 1137 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 FAM83AQ86UY5 434 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PSTKQ8IV42 348 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 TXLNBQ8N3L3 684 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SIMC1Q8NDZ2 872 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 C1orf162Q8NEQ5 155 aaPredicted RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 FBXO18Q8NFZ0 1043 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 HUS1BQ8NHY5 278 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SPATA20Q8TB22 786 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 Q8TCH9 128 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SLC9A6Q92581 669 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 OPTNQ96CV9 577 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 TMEM41AQ96HV5 264 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 AIFM2Q9BRQ8 373 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 CRNKL1Q9BZJ0 848 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 MTFR1LQ9H019 292 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 ISCUQ9H1K1 167 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 NUP62CLQ9H1M0 184 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 MAGEH1Q9H213 219 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 VPS16Q9H269 839 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 KCNK13Q9HB14 408 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SARS2Q9NP81 518 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 C8orf4Q9NR00 106 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 OR6C2Q9NZP2 312 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SNX6Q9UNH7 406 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 CAMK2AQ9UQM7 478 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 ZNF148Q9UQR1 794 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PIN4Q9Y237 131 aaKnown RBP5.59□□□□□ -1.51
VPS41-209ENST00000457055 ASB3Q9Y575 518 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PCDHGB2Q9Y5G2 931 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 TRPV2Q9Y5S1 764 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 SBF2Q86WG5 1849 aa5.59□□□□□ -1.51
VPS41-209ENST00000457055 PTPN23Q9H3S7 1636 aa5.59□□□□□ -1.52
VPS41-209ENST00000457055 NRXN3Q9Y4C0 1643 aa5.59□□□□□ -1.52
VPS41-209ENST00000457055 ATP10DQ9P241 1426 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 CCDC162PA2VCL2 907 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 H0YAE9 185 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 PGRMC2O15173 223 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 FFAR2O15552 330 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 KRT86O43790 486 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms