RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PLK1P53350 603 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 GALCP54803 685 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 ADPRHP54922 357 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 HDAC4P56524 1084 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 RPL7AP62424 266 aaKnown RBP9.92□□□□□ -0.82
USP54-207ENST00000451492 PPP2CBP62714 309 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 PPP2CAP67775 309 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 IL9RQ01113 521 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 BNC1Q01954 994 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 C5orf22Q49AR2 442 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 FAM72AQ5TYM5 149 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 E4F1Q66K89 784 aaPredicted RBP9.92□□□□□ -0.82
USP54-207ENST00000451492 KIAA0895LQ68EN5 471 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 FAM72DQ6L9T8 149 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 C22orf39Q6P5X5 142 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 WDR59Q6PJI9 974 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 LEKR1Q6ZMV7 388 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 USP30Q70CQ3 517 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 BNIPLQ7Z465 357 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 FAM72BQ86X60 149 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 PYROXD2Q8N2H3 581 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 C3orf20Q8ND61 904 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 PIP4K2CQ8TBX8 421 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 GRIN3AQ8TCU5 1115 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 FRS2Q8WU20 508 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 DNASE2BQ8WZ79 361 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 BAP1Q92560 729 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 SLC6A18Q96N87 628 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 NAP1L5Q96NT1 182 aaPredicted RBP9.92□□□□□ -0.82
USP54-207ENST00000451492 HAPLN3Q96S86 360 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 PPP1R9BQ96SB3 815 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 FUCA2Q9BTY2 467 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 C2orf49Q9BVC5 232 aaPredicted RBP9.92□□□□□ -0.82
USP54-207ENST00000451492 GAREM1Q9H706 876 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 CBX8Q9HC52 389 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 ATP13A1Q9HD20 1204 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 TM9SF3Q9HD45 589 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 AASDHPPTQ9NRN7 309 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 NDFIP2Q9NV92 336 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 OR12D3Q9UGF7 316 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 SARDHQ9UL12 918 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 SCML1Q9UN30 329 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 TBC1D30Q9Y2I9 924 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 OR51B4Q9Y5P0 310 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 WDFY3Q8IZQ1 3526 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 SPEGQ15772 3267 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 SPTBN2O15020 2390 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 IGLV3-10A0A075B6K4 115 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3DA0A087WVF3 549 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3IA0A087WXS9 549 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3EA0A087X179 549 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3KA0A087X1G2 549 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3FA6NER0 549 aaPredicted RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 LRRC10BA6NIK2 292 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 DRGXA6NNA5 263 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3LB9A6J9 549 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 KPNA3O00505 521 aaPredicted RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 SMAD6O43541 496 aaKnown RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 ATP9BO43861 1147 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 CREB3O43889 395 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 SH3BP5O60239 455 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 CER1O95813 267 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TOP3BO95985 862 aaKnown RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 IGHV4-34P06331 123 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 CTSLP07711 333 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 CCDC172P0C7W6 258 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3HP0C7X1 549 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 SKILP12757 684 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 C5AR1P21730 350 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 ADRA1BP35368 520 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 DRD3P35462 400 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 ACVRL1P37023 503 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 PTPN9P43378 593 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 DNA2P51530 1060 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 AFF3P51826 1226 aaKnown RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 TPM4P67936 248 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 FAM193AP78312 1265 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 SIM1P81133 766 aaPredicted RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 CNTN1Q12860 1018 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 SFSWAPQ12872 951 aaKnown RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 ARID5BQ14865 1188 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 IQCB1Q15051 598 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TEAD4Q15561 434 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 KLHL40Q2TBA0 621 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 SFMBT2Q5VUG0 894 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3GQ6DHY5 549 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3CQ6IPX1 549 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 DCUN1D2Q6PH85 259 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 STRADAQ7RTN6 431 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 DSG4Q86SJ6 1040 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 SETD3Q86TU7 594 aaPredicted RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 PHF13Q86YI8 300 aaPredicted RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 NAXDQ8IW45 347 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D3Q8IZP1 549 aaPredicted RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 DCAF4L2Q8NA75 395 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 CHST14Q8NCH0 376 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 OR2T34Q8NGX1 318 aa9.91□□□□□ -0.82
USP54-207ENST00000451492 SETD7Q8WTS6 366 aaKnown RBP9.91□□□□□ -0.82
USP54-207ENST00000451492 TBC1D31Q96DN5 1066 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms