RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.71□□□□□ -0.85
SMPD4P1-203ENST00000443839 PLAAQ9Y263 795 aa9.71□□□□□ -0.85
SMPD4P1-203ENST00000443839 ZNF510Q9Y2H8 683 aa9.71□□□□□ -0.85
SMPD4P1-203ENST00000443839 NOTCH4Q99466 2003 aa9.71□□□□□ -0.85
SMPD4P1-203ENST00000443839 PRRC2BQ5JSZ5 2229 aaKnown RBP9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 POLR3GO15318 223 aaPredicted RBP9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZBTB24O43167 697 aaPredicted RBP9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 GREM1O60565 184 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 MOSPD3O75425 235 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 ACSL3O95573 720 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 RHOCP08134 193 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 MAGEA4P43358 317 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 MAGEA6P43360 314 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 PDIA2Q13087 525 aaKnown RBP9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 HSP90B2PQ58FF3 399 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 PRSS36Q5K4E3 855 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 HTR3DQ70Z44 454 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 CHST9Q7L1S5 443 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 BBS7Q8IWZ6 715 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZBED8Q8IZ13 594 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 IQCKQ8N0W5 287 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 GOLGA6L1Q8N7Z2 621 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 HJURPQ8NCD3 748 aaPredicted RBP9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 NSMCE1Q8WV22 266 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 ING5Q8WYH8 240 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 BHMTQ93088 406 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 PABPC5Q96DU9 382 aaKnown RBP9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 TMA16Q96EY4 203 aaKnown RBP9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 C9orf72Q96LT7 481 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 TEKT5Q96M29 485 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZIM3Q96PE6 472 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 FRMD8Q9BZ67 464 aaPredicted RBP9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 GBA3Q9H227 469 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 TDP1Q9NUW8 608 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 DZANK1Q9NVP4 752 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 IGSF9Q9P2J2 1179 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZMYM5Q9UJ78 669 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 CCL26Q9Y258 94 aa9.71□□□□□ -0.86
SMPD4P1-203ENST00000443839 HELZP42694 1942 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 SOBPA7XYQ1 873 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 H0Y626 953 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 J3KR12 359 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 RIPK2O43353 540 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 TBL1XO60907 577 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 CEBPBP17676 345 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 NFKB1P19838 968 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 TPSB2P20231 275 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 ACVRL1P37023 503 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 NUMBP49757 651 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 IFI35P80217 286 aaPredicted RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 SARNPP82979 210 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 GNA12Q03113 381 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 IFFO1Q0D2I5 559 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 SERINC3Q13530 473 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 SLC29A2Q14542 456 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 TPSAB1Q15661 275 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 KYNUQ16719 465 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 BBS9Q3SYG4 887 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 HP1BP3Q5SSJ5 553 aaPredicted RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 FNBP1LQ5T0N5 605 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 IL31Q6EBC2 164 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 RELL1Q8IUW5 271 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 TDRD5Q8NAT2 981 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 VN1R2Q8NFZ6 395 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 DDI1Q8WTU0 396 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 SERPINB12Q96P63 405 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 PHACTR1Q9C0D0 580 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 MAGEH1Q9H213 219 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 RBM22Q9NW64 420 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 TRIOBPQ9H2D6 2365 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 UNC80Q8N2C7 3258 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 A0A0D9SEW6 157 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 E2F8A0AVK6 867 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 H3BQF6 201 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 PRAMEF12O95522 483 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 TTC4O95801 387 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 RENBPP51606 427 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 CDK16Q00536 496 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 CDH18Q13634 790 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 PRPSAP1Q14558 356 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 CBX2Q14781 532 aaPredicted RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 FASTKD3Q14CZ7 662 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 CHRDL2Q6WN34 429 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 SETD3Q86TU7 594 aaPredicted RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 FAM217AQ8IXS0 508 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 CARNMT1Q8N4J0 409 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 MCUQ8NE86 351 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 OR2W6PQ8NHA6 318 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 UHMK1Q8TAS1 419 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 ZSCAN18Q8TBC5 510 aaPredicted RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 ARHGEF2Q92974 986 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 USP13Q92995 863 aaPredicted RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 TTC25Q96NG3 672 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 IL12RB2Q99665 862 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 SPON2Q9BUD6 331 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 MUC3BQ9H195 1237 aa9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 NSUN3Q9H649 340 aaKnown RBP9.7□□□□□ -0.86
SMPD4P1-203ENST00000443839 XAB2Q9HCS7 855 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms