RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TPX2Q9ULW0 747 aaKnown RBP14.59□□□□□ -0.07
SHMT1P1-201ENST00000419974 SHOC2Q9UQ13 582 aa14.59□□□□□ -0.07
SHMT1P1-201ENST00000419974 OR51B4Q9Y5P0 310 aa14.59□□□□□ -0.07
SHMT1P1-201ENST00000419974 HELZP42694 1942 aaKnown RBP14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 DOCK4Q8N1I0 1966 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 CHADO15335 359 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 KDELR3O43731 214 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 PRAMEF11O60813 436 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 IL9P15248 144 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 FCARP24071 287 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 PTPN3P26045 913 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 HOXD9P28356 352 aaPredicted RBP14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 FDFT1P37268 417 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 ADCY8P40145 1251 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 CLCN6P51797 869 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 DLX2Q07687 328 aaPredicted RBP14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 FCHO2Q0JRZ9 810 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 AP1B1Q10567 949 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 CALCOCO2Q13137 446 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 SEMA5AQ13591 1074 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 SMAD2Q15796 467 aaKnown RBP14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 PARP6Q2NL67 630 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 FAM78AQ5JUQ0 283 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 SPDYCQ5MJ68 293 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 ANKRD20A2Q5SQ80 823 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 RNASEH2BQ5TBB1 312 aaKnown RBP14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 ANKRD20A1Q5TYW2 823 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 ANKRD20A3Q5VUR7 823 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZDHHC24Q6UX98 284 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 CEP128Q6ZU80 1094 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 TFAP2DQ7Z6R9 452 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 TP53INP2Q8IXH6 220 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 GJD3Q8N144 294 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 CCNYQ8ND76 341 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 AENQ8WTP8 325 aaKnown RBP14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 IRF7Q92985 503 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 LMLNQ96KR4 655 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 TEKT5Q96M29 485 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 EIF2B3Q9NR50 452 aaKnown RBP14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 SPHK2Q9NRA0 654 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 FBXO10Q9UK96 956 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 SNX24Q9Y343 169 aa14.58□□□□□ -0.08
SHMT1P1-201ENST00000419974 NUP210Q8TEM1 1887 aaPredicted RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 C19orf67A6NJJ6 358 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 ERI2A8K979 691 aaKnown RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 HOXC11O43248 304 aaPredicted RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 MBTPS2O43462 519 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 IFNB1P01574 187 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZSCAN5DPP0CG00 497 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 CCNB1P14635 433 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 SGSHP51688 502 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 MRPS25P82663 173 aaKnown RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 GPS1Q13098 491 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 SMAD4Q13485 552 aaKnown RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 CBX2Q14781 532 aaPredicted RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 ALG1LQ6GMV1 187 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 EP400NLQ6ZTU2 488 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 KIAA0907Q7Z7F0 614 aaPredicted RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 METTL3Q86U44 580 aaKnown RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 PPIL6Q8IXY8 311 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 CFAP52Q8N1V2 620 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 MREGQ8N565 214 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 NAT8LQ8N9F0 302 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 MCUQ8NE86 351 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 BPIFB1Q8TDL5 484 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 ELSPBP1Q96BH3 223 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 ALG14Q96F25 216 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 HMCESQ96FZ2 354 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 CELF6Q96J87 481 aaKnown RBP14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 PDFQ9HBH1 243 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 CD320Q9NPF0 282 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 HAUS2Q9NVX0 235 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 EPS15L1Q9UBC2 864 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 CD207Q9UJ71 328 aa14.57□□□□□ -0.08
SHMT1P1-201ENST00000419974 ESYT3A0FGR9 886 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 RNF103O00237 685 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 TBL1XO60907 577 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ECI2O75521 394 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 MAP3K6O95382 1288 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 MYBL2P10244 700 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 TPSB2P20231 275 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 DMC1Q14565 340 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 KCNJ11Q14654 390 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 PDGFRLQ15198 375 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 TRADDQ15628 312 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 TPSAB1Q15661 275 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 SLC14A2Q15849 920 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 INO80DQ53TQ3 878 aaPredicted RBP14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 BEND6Q5SZJ8 279 aaPredicted RBP14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ARMC3Q5W041 872 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ITPRIPL1Q6GPH6 555 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 MFSD6LQ8IWD5 586 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ADHFE1Q8IWW8 467 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZNF567Q8N184 647 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ZCCHC9Q8N567 271 aaKnown RBP14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 FBXO25Q8TCJ0 367 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 DDI1Q8WTU0 396 aa14.56□□□□□ -0.08
SHMT1P1-201ENST00000419974 ING5Q8WYH8 240 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms