RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 A8MVJ9 347 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 A8MXE2 369 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 C1QTNF3-AMACRE9PGA6 284 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CBFA2T3O75081 653 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 GGPS1O95749 300 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 EIF2S1P05198 315 aaKnown RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 IL6RP08887 468 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 TMEM225BP0DP42 221 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CHN1P15882 459 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ZFXP17010 805 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ATF7P17544 494 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 SAT1P21673 171 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 HPDP32754 393 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 PNPLA4P41247 253 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 GSTM5P46439 218 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CPA2P48052 419 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 HSD17B4P51659 736 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 TPTEP56180 551 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 RPL7AP62424 266 aaKnown RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CRYMQ14894 314 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 NAA25Q14CX7 972 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 E2F5Q15329 346 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 PTPN14Q15678 1187 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 TXNRD1Q16881 649 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 LSM12Q3MHD2 195 aaKnown RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ZNF766Q5HY98 468 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 TMEM196Q5HYL7 178 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 RAB41Q5JT25 222 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ALKBH5Q6P6C2 394 aaKnown RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 KLHL35Q6PF15 583 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 IYDQ6PHW0 289 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CPLX2Q6PUV4 134 aaKnown RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 SLC2A7Q6PXP3 512 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CRELD2Q6UXH1 353 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 FAM83HQ6ZRV2 1179 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 BTN2A1Q7KYR7 527 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 GALNT7Q86SF2 657 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 LCA5Q86VQ0 697 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 SCN4BQ8IWT1 228 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ADGRF2Q8IZF7 708 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 LCORLQ8N3X6 602 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ZNF366Q8N895 744 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 PTGR2Q8N8N7 351 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 MOSPD2Q8NHP6 518 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 PGAP3Q96FM1 320 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 VPS50Q96JG6 964 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CCDC43Q96MW1 224 aaKnown RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 PIGSQ96S52 555 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CD180Q99467 661 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 MLST8Q9BVC4 326 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ABCG4Q9H172 646 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 OPA3Q9H6K4 179 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 SUCLA2Q9P2R7 463 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-204ENST00000412061 DKK3Q9UBP4 350 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ANAPC5Q9UJX4 755 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 ZBTB1Q9Y2K1 713 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 CCL27Q9Y4X3 112 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 GAGE10A6NGK3 116 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 VWC2LB2RUY7 222 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 M0QYT0 321 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 CPLX1O14810 134 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 TP73O15350 636 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 IPO8O15397 1037 aaKnown RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 HMMRO75330 724 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 PMPCBO75439 489 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 CSPG5O95196 566 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 URODP06132 367 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 DLDP09622 509 aaKnown RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 HKR1P10072 659 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 ACP5P13686 325 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 TNNT1P13805 278 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 DRD1P21728 446 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 TLX1P31314 330 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 GKP32189 559 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 PBX1P40424 430 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 PBX3P40426 434 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 CAPZA2P47755 286 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 LMAN1P49257 510 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 DGKQP52824 942 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 PDE1AP54750 535 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 SUMO2P61956 95 aaKnown RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 UFM1P61960 85 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 DDR1Q08345 913 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 TMEM115Q12893 351 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 MTAPQ13126 283 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 SLC9B1Q4ZJI4 515 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 PLAC9Q5JTB6 97 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 UBAP2Q5T6F2 1119 aaKnown RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 ERMARDQ5T6L9 678 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 KIAA0895LQ68EN5 471 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 ANKRD40Q6AI12 368 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 ADALQ6DHV7 355 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 ISM2Q6H9L7 571 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 C11orf88Q6PI97 169 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 NCEH1Q6PIU2 408 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 CNSTQ6PJW8 725 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 Q6ZNX1 250 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 CHST9Q7L1S5 443 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 LINC00346Q8IVM7 164 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 KIAA2013Q8IYS2 634 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms