RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PDE12Q6L8Q7 609 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 RFWD3Q6PCD5 774 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MRPL43Q8N983 215 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 DEPDC1BQ8WUY9 529 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 AUTS2Q8WXX7 1259 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ARNTL2Q8WYA1 636 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CSPG4P5Q96PW8 444 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TMLHEQ9NVH6 421 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 UGT1A9O60656 530 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 BPGMP07738 259 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 OR4Q2P0C623 313 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MLNP12872 115 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 OR1D2P34982 312 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PTDSS1P48651 473 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 RPL34P49207 117 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 BCAT1P54687 386 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 BST2Q10589 180 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SLC10A2Q12908 348 aaPredicted RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 NFE2Q16621 373 aaPredicted RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 HEATR6Q6AI08 1181 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 RINLQ6ZS11 566 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PAQR9Q6ZVX9 377 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CRLF3Q8IUI8 442 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 NDUFAF2Q8N183 169 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ANKRD52Q8NB46 1076 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SLC2A14Q8TDB8 520 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PRR11Q96HE9 360 aaPredicted RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 KCTD15Q96SI1 283 aaPredicted RBP16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 B3GNT5Q9BYG0 378 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SLC13A1Q9BZW2 595 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 NMUR2Q9GZQ4 415 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 UGT1A7Q9HAW7 530 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 UGT1A10Q9HAW8 530 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 UGT1A8Q9HAW9 530 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ENTPD7Q9NQZ7 604 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PCMTD2Q9NV79 361 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MOCS1Q9NZB8 636 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ADAM12O43184 909 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SNNO75324 88 aaPredicted RBP16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CCDC130P13994 396 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 RPL17P18621 184 aaKnown RBP16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TFE3P19532 575 aaPredicted RBP16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ATP6V1C1P21283 382 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ACADSBP45954 432 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 BLMHQ13867 455 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TBCCQ15814 346 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 KHDC1Q4VXA5 237 aaKnown RBP16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SLC39A12Q504Y0 691 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TRMT10BQ6PF06 316 aaKnown RBP16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 KYAT3Q6YP21 454 aaKnown RBP16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TTC7BQ86TV6 843 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ACMSDQ8TDX5 336 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TFB1MQ8WVM0 346 aaKnown RBP16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MECRQ9BV79 373 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 LMAN2LQ9H0V9 348 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MTMR10Q9NXD2 777 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TAS2R1Q9NYW7 299 aa16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 RCOR3Q9P2K3 495 aaPredicted RBP16.28■□□□□ 0.2
CHRFAM7A-203ENST00000401522 A0A0A0MRY4 1105 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 HMX2A2RU54 273 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 C2orf71A6NGG8 1288 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CAPN14A8MX76 684 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 H0Y3Z8 333 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TEX28O15482 410 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ABLIM3O94929 683 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CNPP09543 421 aaKnown RBP16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 NDUFV1P49821 464 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 NAB1Q13506 487 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 RAB33AQ14088 237 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MARK2Q7KZI7 788 aaKnown RBP16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 STRADAQ7RTN6 431 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ALYREFQ86V81 257 aaKnown RBP16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MPP5Q8N3R9 675 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 STKLD1Q8NE28 680 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ZNF461Q8TAF7 563 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 C2orf15Q8WU43 125 aaKnown RBP16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MYLPFQ96A32 169 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FUBP3Q96I24 572 aaKnown RBP eCLIP16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SPATA13Q96N96 652 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 OLFM3Q96PB7 478 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SIKE1Q9BRV8 207 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ZNF576Q9H609 170 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 EIF2B3Q9NR50 452 aaKnown RBP16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SUFUQ9UMX1 484 aa16.27■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 WDR27A2RRH5 827 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 EPOPA6NHQ4 379 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ALDH1A2O94788 518 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 STK10O94804 968 aaKnown RBP16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CPB1P15086 417 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ACADSP16219 412 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ARPP19P56211 112 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 FAM182AQ5T1J6 154 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MROH9Q5TGP6 573 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 TPGS2Q68CL5 300 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 NCBP2-AS2Q69YL0 99 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CCNJLQ8IV13 435 aa16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PSTKQ8IV42 348 aaKnown RBP16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ARID3BQ8IVW6 561 aaPredicted RBP16.27■□□□□ 0.19
CHRFAM7A-203ENST00000401522 LMNTD2Q8IXW0 634 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms