RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ERMARDQ5T6L9 678 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 FAXCQ5TGI0 409 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 DAB2IPQ5VWQ8 1189 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 KCNT2Q6UVM3 1135 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZNF600Q6ZNG1 722 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 TLK2Q86UE8 772 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SCN4BQ8IWT1 228 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 TXLNBQ8N3L3 684 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 GANCQ8TET4 914 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 AFG1LQ8WV93 481 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 THAP4Q8WY91 577 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 HHIPQ96QV1 700 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 POP1Q99575 1024 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CELF4Q9BZC1 486 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 WDR11Q9BZH6 1224 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 DDX47Q9H0S4 455 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZNF576Q9H609 170 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 LRRC4CQ9HCJ2 640 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ARMCX3Q9UH62 379 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 MYPNQ86TC9 1320 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 MYH7BA7E2Y1 1941 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 RNF103-CHMP3A0A140T963 221 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ARVCFO00192 962 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 RNF103O00237 685 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 VEGFDO43915 354 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 XYLBO75191 536 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 NR3C1P04150 777 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 TP53P04637 393 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CLEC3BP05452 202 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 WNT5AP41221 380 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 PHC1P78364 1004 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SMAD3P84022 425 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 GUCY1A3Q02108 690 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 GALNT2Q10471 571 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 BTG3Q14201 252 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CBWD6Q4V339 395 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZCWPW2Q504Y3 356 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CBWD3Q5JTY5 395 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CBWD5Q5RIA9 395 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 IER5Q5VY09 327 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CARFQ8N187 725 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 BVESQ8NE79 360 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 NCLNQ969V3 563 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 BTBD6Q96KE9 485 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SUSD3Q96L08 255 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 FER1L6-AS2Q96M78 137 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 MOV10L1Q9BXT6 1211 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 NFKBIZQ9BYH8 718 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZNF341Q9BYN7 854 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 DPH5Q9H2P9 285 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 EPB41L5Q9HCM4 733 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 COL20A1Q9P218 1284 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 APPL1Q9UKG1 709 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 NR2E1Q9Y466 385 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 PCDHA2Q9Y5H9 948 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 NR2E3Q9Y5X4 410 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SCN9AQ15858 1988 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 DICER1Q9UPY3 1922 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ESYT2A0FGR8 921 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 PMS2P1A4D2B8 440 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 URADA6NGE7 173 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 GFRA2O00451 464 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CXCL11O14625 94 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 MAP2K7O14733 419 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 PPEF2O14830 753 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 LILRA1O75019 489 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CST3P01034 146 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 INHBAP08476 426 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 EEF1DP29692 281 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ATN1P54259 1190 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 DHX9Q08211 1270 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 TRA2AQ13595 282 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 GALNT3Q14435 633 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SLC9C1Q4G0N8 1177 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZRANB3Q5FWF4 1079 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 FAM83AQ86UY5 434 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 HOOK3Q86VS8 718 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ARMC8Q8IUR7 673 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 NKAIN4Q8IVV8 208 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SYCP3Q8IZU3 236 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 GALNT4Q8N4A0 578 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 MR1Q95460 341 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SAAL1Q96ER3 474 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SIPA1Q96FS4 1042 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 CUEDC2Q9H467 287 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 MVB12BQ9H7P6 319 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 KCNMB3Q9NPA1 279 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 PICK1Q9NRD5 415 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 NDFIP2Q9NV92 336 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 IGSF9BQ9UPX0 1349 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 PVALEFA0A1B0GWK0 134 aa6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 EME2A4GXA9 379 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 KPNA7A9QM74 516 aa6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 H0YCG3 227 aa6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 MYO1FO00160 1098 aa6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZSCAN9O15535 394 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 DIAPH2O60879 1101 aa6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 HEXIM1O94992 359 aaKnown RBP6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 SYF2O95926 243 aaKnown RBP6.37□□□□□ -1.39
TRAPPC13-202ENST00000399438 CYP3A4P08684 503 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms