RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SFSWAPQ12872 951 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 OLIG2Q13516 323 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 APOFQ13790 326 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 FLOT2Q14254 428 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 GPR162Q16538 588 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 ARHGAP17Q68EM7 881 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 DUS1LQ6P1R4 473 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 BORAQ6PGQ7 559 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 ADCY4Q8NFM4 1077 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 PHF12Q96QT6 1004 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 EIF2AQ9BY44 585 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 COG4Q9H9E3 785 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 SYBUQ9NX95 663 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 MAGEB3O15480 346 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 PSMB4P28070 264 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 TYK2P29597 1187 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 MSX2P35548 267 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 NUDT2P50583 147 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF618Q5T7W0 954 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 ARL10Q8N8L6 244 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 FAM149B1Q96BN6 582 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 PPP1R14BQ96C90 147 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 PGBD4Q96DM1 585 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 CEPT1Q9Y6K0 416 aa16.93■□□□□ 0.3
PCDHA1-201ENST00000378133 PGAM1P18669 254 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 CDH2P19022 906 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 BCAT1P54687 386 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 PITX1P78337 314 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 TAPT1Q6NXT6 567 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 UNC93AQ86WB7 457 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 TMEM126BQ8IUX1 230 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 DEFB106AQ8N104 65 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 NUP93Q8N1F7 819 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 CDRT15Q96T59 188 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 C16orf70Q9BSU1 422 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 COPG2Q9UBF2 871 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 RIMS3Q9UJD0 308 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 GJD2Q9UKL4 321 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 HACD1B0YJ81 288 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 H3BRB1 525 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ADCY6O43306 1168 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 F7P08709 466 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 HOXA11P31270 313 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 GNL1P36915 607 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 SERPINB5P36952 375 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 HARS2P49590 506 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 CDKL1Q00532 357 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ZBTB6Q15916 424 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ADRM1Q16186 407 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 USP41Q3LFD5 358 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ZFP1Q6P2D0 407 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 AMIGO2Q86SJ2 522 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF554Q86TJ5 538 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ERO1BQ86YB8 467 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 TICAM1Q8IUC6 712 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 TP53INP2Q8IXH6 220 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 SLC2A14Q8TDB8 520 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 GFM2Q969S9 779 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ATXN7L3BQ96GX2 97 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 TUT1Q9H6E5 874 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 TXNDC16Q9P2K2 825 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 FZD10Q9ULW2 581 aa16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 PRPF19Q9UMS4 504 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF638Q14966 1978 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-201ENST00000378133 ASB14A6NK59 587 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 ZNF189O75820 626 aaPredicted RBP16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 SULT1E1P49888 294 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 GTF2A2P52657 109 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 SLC9B1Q4ZJI4 515 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 MARCH8Q5T0T0 291 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 MAMDC4Q6UXC1 1216 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 CMC1Q7Z7K0 106 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 BEST2Q8NFU1 509 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 PLEKHA5Q9HAU0 1116 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 HSPA13P48723 471 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 C9orf57Q5W0N0 161 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 KLHL35Q6PF15 583 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 EPGNQ6UW88 154 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 C16orf89Q6UX73 402 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 TRIM67Q6ZTA4 783 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 STRADAQ7RTN6 431 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 TNS4Q8IZW8 715 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 LILRA2Q8N149 483 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 KBTBD7Q8WVZ9 684 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 HSPBAP1Q96EW2 488 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 SNX27Q96L92 541 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 PRDM12Q9H4Q4 367 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 CDY2AQ9Y6F7 541 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 CDY1Q9Y6F8 540 aa16.91■□□□□ 0.3
PCDHA1-201ENST00000378133 CXCL11O14625 94 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 THRAP10827 490 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 CD1EP15812 388 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 XRCC1P18887 633 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 AKAP5P24588 427 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 ADCYAP1R1P41586 468 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 MATKP42679 507 aa16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 IREB2P48200 963 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-201ENST00000378133 THOP1P52888 689 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms