RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TMEM51Q9NW97 253 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 KPNA5O15131 536 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 AHCYL1O43865 530 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 ETS1P14921 441 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 S100A3P33764 101 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 TRAP1Q12931 704 aaKnown RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 RGS21Q2M5E4 152 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 CBWD6Q4V339 395 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 INTS11Q5TA45 600 aaKnown RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 MFSD1Q9H3U5 465 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 SNRNP200O75643 2136 aaKnown RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 ZBTB14O43829 449 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 PYDC2Q56P42 97 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 FBXO47Q5MNV8 452 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 OVOS1Q6IE37 1185 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 MILR1Q7Z6M3 343 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 ANKRD13AQ8IZ07 590 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 OR7A2PQ8NGA2 310 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 MROH8Q9H579 483 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 RBM22Q9NW64 420 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 SOHLH2Q9NX45 425 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 UXTQ9UBK9 157 aaPredicted RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 KLRC2P26717 231 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 COLGALT2Q8IYK4 626 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 SPATA5L1Q9BVQ7 753 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 DGCR6LQ9BY27 220 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 SPON1Q9HCB6 807 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 NDUFS2O75306 463 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 CTSEP14091 401 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 RASA1P20936 1047 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 TUBP50607 506 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 DGCR6Q14129 220 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 VPS72Q15906 364 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 IRAK3Q9Y616 596 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 APC2O95996 2303 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 RHOBTB2Q9BYZ6 727 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 POMKQ9H5K3 350 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 MED24O75448 989 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 SUPT20HL2P0C7V6 817 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 CRATP43155 626 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 TMBIM4Q9HC24 238 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 INTS7Q9NVH2 962 aaKnown RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 SUCOQ9UBS9 1254 aaKnown RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 SPATA31A3Q5VYP0 1347 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 STX16-NPEPL1H3BU86 382 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 STX16O14662 325 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 LIN7AO14910 233 aaPredicted RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 LAMTOR4Q0VGL1 99 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 PAGE2Q7Z2X7 111 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 RP9Q8TA86 221 aaKnown RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 DPF2Q92785 391 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 COL26A1Q96A83 441 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 TEKT5Q96M29 485 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 TNPO3Q9Y5L0 923 aaKnown RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 PTPAQ15257 358 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 KYAT3Q6YP21 454 aaKnown RBP12.65□□□□□ -0.38
VPS13A-204ENST00000376634 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 CCDC167Q9P0B6 97 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 PCDHGA3Q9Y5H0 932 aa12.65□□□□□ -0.38
VPS13A-204ENST00000376634 ARMC8Q8IUR7 673 aa12.65□□□□□ -0.39
VPS13A-204ENST00000376634 ZNF276Q8N554 614 aa12.65□□□□□ -0.39
VPS13A-204ENST00000376634 METTL6Q8TCB7 284 aa12.65□□□□□ -0.39
VPS13A-204ENST00000376634 EEF1AKMT1Q8WVE0 214 aa12.65□□□□□ -0.39
VPS13A-204ENST00000376634 BTBD10Q9BSF8 475 aa12.65□□□□□ -0.39
VPS13A-204ENST00000376634 UNKQ9C0B0 810 aaKnown RBP12.65□□□□□ -0.39
VPS13A-204ENST00000376634 A0A0X1KG70 313 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 CDC42P60953 191 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 GMFBP60983 142 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 ZNF846Q147U1 533 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 ZNF549Q6P9A3 640 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 CXXC5Q7LFL8 322 aaKnown RBP12.64□□□□□ -0.39
VPS13A-204ENST00000376634 CCDC36Q8IYA8 594 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 OMDQ99983 421 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 UBOX5O94941 541 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 CLUP10909 449 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 PEX5LQ8IYB4 626 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 C8orf59Q8N0T1 100 aaPredicted RBP12.64□□□□□ -0.39
VPS13A-204ENST00000376634 CHID1Q9BWS9 393 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 NEUROD4Q9HD90 331 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 ZDHHC17Q8IUH5 632 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 ANKRD7Q92527 254 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 PRCCQ92733 491 aaPredicted RBP12.64□□□□□ -0.39
VPS13A-204ENST00000376634 HAVCR1Q96D42 359 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 CBWD1Q9BRT8 395 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 JMJD4Q9H9V9 463 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 ARHGEF17Q96PE2 2063 aaPredicted RBP12.64□□□□□ -0.39
VPS13A-204ENST00000376634 PRODHO43272 600 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 ATP6V1G2O95670 118 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 SLC26A2P50443 739 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 TMEM63BQ5T3F8 832 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 PHF10Q8WUB8 498 aaKnown RBP12.64□□□□□ -0.39
VPS13A-204ENST00000376634 SERPINB11Q96P15 392 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 MAGEC1O60732 1142 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 FAM171BQ6P995 826 aa12.64□□□□□ -0.39
VPS13A-204ENST00000376634 B3GNT6Q6ZMB0 384 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms