RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 MPP5Q8N3R9 675 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 RNF148Q8N7C7 305 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 HPDLQ96IR7 371 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 RANBP9Q96S59 729 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 CDRT15Q96T59 188 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 HAUS8Q9BT25 410 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 DPP3Q9NY33 737 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 NME7Q9Y5B8 376 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 PRSS51A0A1B0GVH4 220 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 MANSC4A6NHS7 340 aaPredicted RBP13.18□□□□□ -0.3
MSH5-204ENST00000375755 H7C0C1 242 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 ATP5OP48047 213 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 HSPA13P48723 471 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 PSEN2P49810 448 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 PKNOX1P55347 436 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 SLC10A2Q12908 348 aaPredicted RBP13.18□□□□□ -0.3
MSH5-204ENST00000375755 ZNF423Q2M1K9 1284 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 PTPN20Q4JDL3 420 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 UBA3Q8TBC4 463 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 BCO2Q9BYV7 579 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 CACNG4Q9UBN1 327 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 ZNF236Q9UL36 1845 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 C7orf72A4D263 438 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 SERPINB7O75635 380 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 LSM8O95777 96 aaKnown RBP13.17□□□□□ -0.3
MSH5-204ENST00000375755 PGK1P00558 417 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 CAPNS1P04632 268 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 PRKCGP05129 697 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 APRTP07741 180 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 IDO1P14902 403 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 PTPN1P18031 435 aaKnown RBP13.17□□□□□ -0.3
MSH5-204ENST00000375755 CYP3A5P20815 502 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 GMPRP36959 345 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 NDST2P52849 883 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 CBLBQ13191 982 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 SLC9B1Q4ZJI4 515 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 PPM1LQ5SGD2 360 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 ITPRIPL1Q6GPH6 555 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 ZFP1Q6P2D0 407 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 TIFABQ6ZNK6 161 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 BHLHE22Q8NFJ8 381 aaPredicted RBP13.17□□□□□ -0.3
MSH5-204ENST00000375755 LRRN4Q8WUT4 740 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 GOLGA2P5Q9HBQ8 144 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 LAMA3Q16787 3333 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 FOXD2O60548 495 aaPredicted RBP13.17□□□□□ -0.3
MSH5-204ENST00000375755 ALDOAP04075 364 aaKnown RBP13.17□□□□□ -0.3
MSH5-204ENST00000375755 SLC10A3P09131 477 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 KRT3P12035 628 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 SERPINB5P36952 375 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 RELAQ04206 551 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 CEACAM7Q14002 265 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
MSH5-204ENST00000375755 PPP2R5DQ14738 602 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 NRF1Q16656 503 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 TMEM102Q8N9M5 508 aaPredicted RBP13.17□□□□□ -0.3
MSH5-204ENST00000375755 DEPDC1BQ8WUY9 529 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 KLC2Q9H0B6 622 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 EPS15L1Q9UBC2 864 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 PRPF19Q9UMS4 504 aaKnown RBP13.17□□□□□ -0.3
MSH5-204ENST00000375755 DOLKQ9UPQ8 538 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 NRCAMQ92823 1304 aa13.17□□□□□ -0.3
MSH5-204ENST00000375755 KCNN4O15554 427 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 ZNF26P17031 533 aaPredicted RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 SERPINB9P50453 376 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 ABCE1P61221 599 aaKnown RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 ADAM17P78536 824 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 KCTD21Q4G0X4 260 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 RAB6CQ53S08 254 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 PIGGQ5H8A4 983 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 FSCBQ5H9T9 825 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 DSELQ8IZU8 1212 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 GSDMBQ8TAX9 411 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 MAPK15Q8TD08 544 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 USP13Q92995 863 aaPredicted RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 WNT8BQ93098 351 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 KLHL32Q96NJ5 620 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 CPXM1Q96SM3 734 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 RAB6CQ9H0N0 254 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 FAM96AQ9H5X1 160 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 PAK5Q9P286 719 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 TPP1O14773 563 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 CBFA2T3O75081 653 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 RNASEH2AO75792 299 aaKnown RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 ZFXP17010 805 aaPredicted RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 MIPP30301 263 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 TGFBIQ15582 683 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 STXBP5Q5T5C0 1151 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 GRAMD4Q6IC98 578 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 BNC2Q6ZN30 1099 aaPredicted RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 SNX32Q86XE0 403 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 SIGLEC10Q96LC7 697 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 OR52B2Q96RD2 323 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 SERPINI1Q99574 410 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 MRPL45Q9BRJ2 306 aaKnown RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 CAAP1Q9H8G2 361 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms