RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 MOSPD1Q9UJG1 213 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 AP4B1Q9Y6B7 739 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF541Q9H0D2 1346 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 C1orf232A0A0U1RR37 186 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 RRN3P2A6NIE6 340 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 DAB1O75553 588 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 DDHD2O94830 711 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 TMCC1O94876 653 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 ASS1P00966 412 aaKnown RBP6.65□□□□□ -1.35
SMC1A-202ENST00000375340 SLC2A4P14672 509 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 UQCRBP14927 111 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 ADORA2AP29274 412 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 CCNG1P51959 295 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 BEX3Q00994 111 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 PPIDQ08752 370 aaKnown RBP6.65□□□□□ -1.35
SMC1A-202ENST00000375340 SQLEQ14534 574 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 NOMO1Q15155 1222 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 C16orf59Q7L2K0 433 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 UNC5BQ8IZJ1 945 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 DGCR6LQ9BY27 220 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 ULBP1Q9BZM6 244 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF395Q9H8N7 513 aaPredicted RBP6.65□□□□□ -1.35
SMC1A-202ENST00000375340 TMPRSS4Q9NRS4 437 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 TBC1D13Q9NVG8 400 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 SLC13A4Q9UKG4 626 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 SNCAIPQ9Y6H5 919 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 CXorf49A8MYA2 514 aaPredicted RBP6.65□□□□□ -1.35
SMC1A-202ENST00000375340 HLA-DPA1P20036 260 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 IL1R2P27930 398 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 OAZ1P54368 228 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 SLC39A4Q6P5W5 647 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 DAW1Q8N136 415 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 MYO1HQ8N1T3 1032 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 FNDC5Q8NAU1 212 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 EMID1Q96A84 441 aaPredicted RBP6.65□□□□□ -1.35
SMC1A-202ENST00000375340 PPP1R2P1Q96PQ5 205 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 TMEM109Q9BVC6 243 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 RBP1P09455 135 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 MMP8P22894 467 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 EIF2B2P49770 351 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PSME3P61289 254 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 MFSD10Q14728 455 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CA9Q16790 459 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ZDHHC17Q8IUH5 632 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SLC4A11Q8NBS3 891 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 FBXO32Q969P5 355 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 C1orf50Q9BV19 199 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SENP6Q9GZR1 1112 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 GOLGA2P5Q9HBQ8 144 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 DMAC2Q9NW81 257 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 H0Y626 953 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 LRCH4O75427 683 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TRIM16O95361 564 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 S100A5P33763 92 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 NPY2RP49146 381 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 MPP1Q00013 466 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 DDX53Q86TM3 631 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PLEKHO2Q8TD55 490 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SMARCD1Q96GM5 515 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TBCDQ9BTW9 1192 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 RIBC2Q9H4K1 309 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 EIF3LQ9Y262 564 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 STAU1O95793 577 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PYGLP06737 847 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 HSMCR30P0CW71 290 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 IL5RAQ01344 420 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 LRRC74AQ0VAA2 488 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 BLMHQ13867 455 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 GALNT3Q14435 633 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SLC27A1Q6PCB7 646 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 C6orf89Q6UWU4 347 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ARCQ7LC44 396 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 C11orf96Q7Z7L8 435 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ATP6V0D2Q8N8Y2 350 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PARK7Q99497 189 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 RTKNQ9BST9 563 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 KATNAL1Q9BW62 490 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PAIP1Q9H074 479 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 KLHL25Q9H0H3 589 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 NDUFAF1Q9Y375 327 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 MAGEB16A2A368 324 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 FAM20BO75063 409 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CCDC166P0CW27 439 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PCNAP12004 261 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 VAC14Q08AM6 782 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CNPY1Q3B7I2 92 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PPM1LQ5SGD2 360 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CACHD1Q5VU97 1274 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 NAT14Q8WUY8 206 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SEC14L1Q92503 715 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CCDC126Q96EE4 140 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 NOL11Q9H8H0 719 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CFAP99D6REC4 459 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SLCO1B7G3V0H7 640 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PEX11AO75192 247 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TIPRLO75663 272 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 FASP25445 335 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CCR1P32246 355 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CDC42EP1Q00587 391 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PRAMEF19Q5SWL8 479 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms