RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 OTUD4Q01804 1114 aaKnown RBP12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 XRCC4Q13426 336 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 PDK1Q15118 436 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 PITRM1Q5JRX3 1037 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 TMEM215Q68D42 235 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 IL31Q6EBC2 164 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 ALYREFQ86V81 257 aaKnown RBP12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 AHI1Q8N157 1196 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 TERB1Q8NA31 727 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 DCAF4L2Q8NA75 395 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 HDAC11Q96DB2 347 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 CAPZA3Q96KX2 299 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 P2RY13Q9BPV8 354 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 SPON2Q9BUD6 331 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 FRMD8P1Q9BZ68 369 aaPredicted RBP12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 BRD8Q9H0E9 1235 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 ATP13A1Q9HD20 1204 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 SMARCAL1Q9NZC9 954 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 CXorf51AA0A1B0GTR3 108 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 PRRT4C9JH25 899 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 DFFAO00273 331 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 TIMM44O43615 452 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 MAFKO60675 156 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 KAT7O95251 611 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 APODP05090 189 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 PAFAH1B1P43034 410 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 NHLH1Q02575 133 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 PRKCQQ04759 706 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 ZNF33AQ06730 810 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 MLF2Q15773 248 aaPredicted RBP12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 CCNG2Q16589 344 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 FUT11Q495W5 492 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 TMEM196Q5HYL7 178 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 MBLAC2Q68D91 279 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 ARHGAP36Q6ZRI8 547 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 TRIM67Q6ZTA4 783 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 CCDC33Q8N5R6 958 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 PRELID2Q8N945 189 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 SLC35B2Q8TB61 432 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 EXOC4Q96A65 974 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 ACDQ96AP0 544 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 HAUS1Q96CS2 278 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 KCNH6Q9H252 994 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 IPO11Q9UI26 975 aaKnown RBP12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 VPS28Q9UK41 221 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 KIAA1549LQ6ZVL6 1849 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 MIA3Q5JRA6 1907 aa12.68□□□□□ -0.38
NIF3L1-201ENST00000359683 PIEZO1Q92508 2521 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 TBC1D3BA6NDS4 549 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 TMEM221A6NGB7 291 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 HACD1B0YJ81 288 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 M0R296 226 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 MAN2B1O00754 1011 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 PPP1R12AO14974 1030 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 PRAMEF11O60813 436 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 GLDCP23378 1020 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 CCNCP24863 283 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 TNFRSF4P43489 277 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 ZXDAP98168 799 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 KDSRQ06136 332 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 SULT2A1Q06520 285 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 PPIDQ08752 370 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 EIF4HQ15056 248 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 CYP1B1Q16678 543 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 DRICH1Q6PGQ1 229 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 NUDT18Q6ZVK8 323 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 FAM3CQ92520 227 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 FATE1Q969F0 183 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 NKD2Q969F2 451 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 LGMNQ99538 433 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 C2orf49Q9BVC5 232 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 PDFQ9HBH1 243 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 HOMER3Q9NSC5 361 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 ELOVL2Q9NXB9 296 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 VPS51Q9UID3 782 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 HPCAL4Q9UM19 191 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 MRFAP1Q9Y605 127 aa12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 NYNRINQ9P2P1 1898 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-201ENST00000359683 KRBA1A5PL33 1030 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ZSCAN5CA6NGD5 496 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 J3KR12 359 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 KRIT1O00522 736 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 LIASO43766 372 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 SNAP91O60641 907 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 CD160O95971 181 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 RBP3P10745 1247 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 DRD1P21728 446 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 STARD6P59095 220 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ARF5P84085 180 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 IL10RBQ08334 325 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 SLC20A2Q08357 652 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 PRKD1Q15139 912 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 PON2Q15165 354 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 WHAMMP3Q1A5X7 153 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 FSTL4Q6MZW2 842 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 TPRG1Q6ZUI0 275 aa12.66□□□□□ -0.38
NIF3L1-201ENST00000359683 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms