RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PPWD1Q96BP3 646 aaKnown RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 ERLEC1Q96DZ1 483 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 TMEM79Q9BSE2 394 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 ACE2Q9BYF1 805 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 NDUFA13Q9P0J0 144 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 SFMBT1Q9UHJ3 866 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 ZNF646O15015 1829 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 COL11A1P12107 1806 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 ZSCAN9O15535 394 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 AP1G1O43747 822 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 SUPT3HO75486 399 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 MYL4P12829 197 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 UGT1A6P19224 532 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 PROZP22891 400 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 GARSP41250 739 aaKnown RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 NDST2P52849 883 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 MBTD1Q05BQ5 628 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 IFRD2Q12894 506 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 GRM3Q14832 879 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 FAM160B1Q5W0V3 765 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 KLC3Q6P597 504 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 C16orf89Q6UX73 402 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 LPCAT2Q7L5N7 544 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 CTU1Q7Z7A3 348 aaKnown RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 KIF12Q96FN5 646 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 RBBP8Q99708 897 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 GCOM2Q9BZD3 368 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-203ENST00000356147 CYP4F12Q9HCS2 524 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 RAB26Q9ULW5 256 aa10.33□□□□□ -0.76
PTPRA-203ENST00000356147 THSD7AQ9UPZ6 1657 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 IGKV6D-21A0A0A0MT36 114 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 ARHGEF37A1IGU5 675 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 C9JVG2 144 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 MATN2O00339 956 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 HDAC3O15379 428 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 STRNO43815 780 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 CLIC3O95833 236 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 TSPAN8P19075 237 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 TPP2P29144 1249 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 ENTPD1P49961 510 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 PSMD7P51665 324 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 PTK2BQ14289 1009 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 TMEM132DQ14C87 1099 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 DGKDQ16760 1214 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 KDELC2Q7Z4H8 507 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 AHI1Q8N157 1196 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 KLHL23Q8NBE8 558 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 NOL11Q9H8H0 719 aaKnown RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 DPP3Q9NY33 737 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 FAF1Q9UNN5 650 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 COPG1Q9Y678 874 aaKnown RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 SOWAHBA6NEL2 793 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 MDM4O15151 490 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 SPRP35270 261 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 ARL4AP40617 200 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 MAGEA10P43363 369 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 SERPINB8P50452 374 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 RPL14P50914 215 aaKnown RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 PLK1P53350 603 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 NME5P56597 212 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 DCTN2Q13561 401 aaKnown RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 MXD4Q14582 209 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 DPYSL2Q16555 572 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 KCTD21Q4G0X4 260 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 DCAF6Q58WW2 860 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 ZNF618Q5T7W0 954 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 FKBP1CQ5VVH2 108 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 KRT80Q6KB66 452 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 TICAM1Q8IUC6 712 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 RNF135Q8IUD6 432 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 TMEM102Q8N9M5 508 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 MIPOL1Q8TD10 442 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 RPL10LQ96L21 214 aaKnown RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 TRIM8Q9BZR9 551 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 FZD8Q9H461 694 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 EPB41L1Q9H4G0 881 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 IL1RL2Q9HB29 575 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 GTSE1Q9NYZ3 720 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 CCDC167Q9P0B6 97 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 RUVBL2Q9Y230 463 aaKnown RBP10.32□□□□□ -0.76
PTPRA-203ENST00000356147 SH3BP1Q9Y3L3 701 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 NUP205Q92621 2012 aa10.32□□□□□ -0.76
PTPRA-203ENST00000356147 FAM149AA5PLN7 773 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 E7ENX8 843 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 NRP1O14786 923 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 TIPRLO75663 272 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 ZNF26P17031 533 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 FUT4P22083 530 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 PPARGP37231 505 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-203ENST00000356147 APOFQ13790 326 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 C16orf72Q14CZ0 275 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 PPP1R3AQ16821 1122 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SH2D4BQ5SQS7 431 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 SLC41A1Q8IVJ1 513 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 OR9I1Q8NGQ6 314 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 USP33Q8TEY7 942 aa10.31□□□□□ -0.76
PTPRA-203ENST00000356147 VPS39Q96JC1 886 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms