RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 HIST2H2ACQ16777 129 aaPredicted RBP18.35■□□□□ 0.53
SMC4-201ENST00000344722 MTX3Q5HYI7 312 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 HIST2H2AA3Q6FI13 130 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 RNF19BQ6ZMZ0 732 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 PIWIL4Q7Z3Z4 852 aaKnown RBP18.35■□□□□ 0.53
SMC4-201ENST00000344722 MYDGFQ969H8 173 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 WBP11Q9Y2W2 641 aaKnown RBP18.35■□□□□ 0.53
SMC4-201ENST00000344722 EML1O00423 815 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 EPHA3P29320 983 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 ANGPT1Q15389 498 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 KCTD19Q17RG1 926 aaPredicted RBP18.35■□□□□ 0.53
SMC4-201ENST00000344722 FAM43BQ6ZT52 329 aaPredicted RBP18.35■□□□□ 0.53
SMC4-201ENST00000344722 PDGFCQ9NRA1 345 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 ADPRHL2Q9NX46 363 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 ZC3H4Q9UPT8 1303 aaKnown RBP18.35■□□□□ 0.53
SMC4-201ENST00000344722 FAM220BPB1ANY3 271 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 KCNH1O95259 989 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 CYP3A4P08684 503 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 STAG3L1P0CL83 205 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 NPNTQ6UXI9 565 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 CASP12Q6UXS9 341 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 FGD2Q7Z6J4 655 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 ATP6V0D2Q8N8Y2 350 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 IL22Q9GZX6 179 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 KRCC1Q9NPI7 259 aaPredicted RBP18.34■□□□□ 0.53
SMC4-201ENST00000344722 ERAP1Q9NZ08 941 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 C2orf71A6NGG8 1288 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 TCF7P36402 384 aaPredicted RBP18.34■□□□□ 0.53
SMC4-201ENST00000344722 RPL26P61254 145 aaKnown RBP18.34■□□□□ 0.53
SMC4-201ENST00000344722 QPRTQ15274 297 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 TBC1D19Q8N5T2 526 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 ACOX2Q99424 681 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 TBL1YQ9BQ87 522 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 NOL11Q9H8H0 719 aaKnown RBP18.34■□□□□ 0.53
SMC4-201ENST00000344722 FADS3Q9Y5Q0 445 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 MYL12BO14950 172 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 SIN3BO75182 1162 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 HMBSP08397 361 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 TAS2R40P59535 323 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 RFX4Q33E94 735 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 NOTUMQ6P988 496 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 CYP4Z2PQ8N1L4 340 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 ZNF540Q8NDQ6 660 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 MUC3BQ9H195 1237 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 GRHL1Q9NZI5 618 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 INVSQ9Y283 1065 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 SPATA31D1Q6ZQQ2 1576 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 KLHL33A6NCF5 533 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 KRT87PA6NCN2 255 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 ABCB1P08183 1280 aaPredicted RBP18.34■□□□□ 0.53
SMC4-201ENST00000344722 CCR3P51677 355 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 METTL21CQ5VZV1 264 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 HERC6Q8IVU3 1022 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 C10orf82Q8WW14 230 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 TEKT5Q96M29 485 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 ZNF317Q96PQ6 595 aaPredicted RBP18.34■□□□□ 0.53
SMC4-201ENST00000344722 ACE2Q9BYF1 805 aaPredicted RBP18.34■□□□□ 0.53
SMC4-201ENST00000344722 REEP1Q9H902 201 aa18.34■□□□□ 0.53
SMC4-201ENST00000344722 ANKRD63C9JTQ0 380 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 TRUB2O95900 331 aaKnown RBP18.33■□□□□ 0.53
SMC4-201ENST00000344722 DBTP11182 482 aaKnown RBP18.33■□□□□ 0.53
SMC4-201ENST00000344722 SLC6A3Q01959 620 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 VPS72Q15906 364 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 PDCD4Q53EL6 469 aaKnown RBP18.33■□□□□ 0.53
SMC4-201ENST00000344722 NIPA1Q7RTP0 329 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 CYP2W1Q8TAV3 490 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 FBXO30Q8TB52 745 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 SPPL2AQ8TCT8 520 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 CENPIQ92674 756 aaPredicted RBP18.33■□□□□ 0.53
SMC4-201ENST00000344722 POP5Q969H6 163 aaKnown RBP18.33■□□□□ 0.53
SMC4-201ENST00000344722 KLHL31Q9H511 634 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 MOV10Q9HCE1 1003 aaKnown RBP18.33■□□□□ 0.53
SMC4-201ENST00000344722 PLK2Q9NYY3 685 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 LRRC42Q9Y546 428 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 GMPPBQ9Y5P6 360 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 GAKO14976 1311 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 CYP3A7-CYP3A51PA0A087WV96 503 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 PIAS1O75925 651 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 CYP3A7P24462 503 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 MMP14P50281 582 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 TUBA4AP68366 448 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 HPCAP84074 193 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 GALNT18Q6P9A2 607 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 ZBTB46Q86UZ6 589 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 ANKRD13AQ8IZ07 590 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 FAM45AQ8TCE6 357 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 RAPGEFL1Q9UHV5 662 aa18.33■□□□□ 0.53
SMC4-201ENST00000344722 WNT7AO00755 349 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 LTA4HP09960 611 aaKnown RBP18.33■□□□□ 0.52
SMC4-201ENST00000344722 SCNN1BP51168 640 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 IKBIPQ70UQ0 350 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 PSTKQ8IV42 348 aaKnown RBP18.33■□□□□ 0.52
SMC4-201ENST00000344722 TSEN34Q9BSV6 310 aaKnown RBP18.33■□□□□ 0.52
SMC4-201ENST00000344722 ATRNO75882 1429 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 MROH1Q8NDA8 1641 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 IL6P05231 212 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 ALOX15P16050 662 aaPredicted RBP18.33■□□□□ 0.52
SMC4-201ENST00000344722 ARPC4P59998 168 aa18.33■□□□□ 0.52
SMC4-201ENST00000344722 INSCQ1MX18 579 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms