RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FUBP3Q96I24 572 aaKnown RBP eCLIP16.22■□□□□ 0.19
PDGFB-201ENST00000331163 RPS6KL1Q9Y6S9 549 aa16.22■□□□□ 0.19
PDGFB-201ENST00000331163 A0A0D9SEW6 157 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 NEDD8-MDP1E9PL57 170 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 CYP11A1P05108 521 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 SLC2A3P11169 496 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 CHRNA4P43681 627 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 PAPOLAP51003 745 aaKnown RBP16.21■□□□□ 0.19
PDGFB-201ENST00000331163 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
PDGFB-201ENST00000331163 NCBP2-AS2Q69YL0 99 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 RAPH1Q70E73 1250 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 MFN1Q8IWA4 741 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 UNC5BQ8IZJ1 945 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 DCLK2Q8N568 766 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 SPDYE1Q8NFV5 336 aaPredicted RBP16.21■□□□□ 0.19
PDGFB-201ENST00000331163 ZNF670Q9BS34 389 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 SLC39A8Q9C0K1 460 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 KDM4CQ9H3R0 1056 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 SARS2Q9NP81 518 aaKnown RBP16.21■□□□□ 0.19
PDGFB-201ENST00000331163 SLC17A6Q9P2U8 582 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 PCYOX1Q9UHG3 505 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 C3orf70A6NLC5 250 aaPredicted RBP16.21■□□□□ 0.19
PDGFB-201ENST00000331163 CREB1P16220 341 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 ERFP50548 548 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 SLC45A4Q5BKX6 768 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 ITIH5Q86UX2 942 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 NAT14Q8WUY8 206 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 KCTD13Q8WZ19 329 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 EXT2Q93063 718 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 BFARQ9NZS9 450 aa16.21■□□□□ 0.19
PDGFB-201ENST00000331163 DNALI1O14645 258 aaPredicted RBP16.21■□□□□ 0.18
PDGFB-201ENST00000331163 C1RP00736 705 aa16.21■□□□□ 0.18
PDGFB-201ENST00000331163 PRKCGP05129 697 aa16.21■□□□□ 0.18
PDGFB-201ENST00000331163 CCNB1P14635 433 aa16.21■□□□□ 0.18
PDGFB-201ENST00000331163 TCEA2Q15560 299 aa16.21■□□□□ 0.18
PDGFB-201ENST00000331163 MARC1Q5VT66 337 aa16.21■□□□□ 0.18
PDGFB-201ENST00000331163 HMCESQ96FZ2 354 aa16.21■□□□□ 0.18
PDGFB-201ENST00000331163 VN1R3Q9BXE9 311 aa16.21■□□□□ 0.18
PDGFB-201ENST00000331163 ABCG8Q9H221 673 aa16.21■□□□□ 0.18
PDGFB-201ENST00000331163 CNOT10Q9H9A5 744 aaKnown RBP16.21■□□□□ 0.18
PDGFB-201ENST00000331163 KRT16P08779 473 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 COL6A1P12109 1028 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 CA4P22748 312 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 CD86P42081 329 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 WASP42768 502 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 TEAD2Q15562 447 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 EML3Q32P44 896 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 AP1ARQ63HQ0 302 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 FBF1Q8TES7 1133 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 ARHGEF2Q92974 986 aaKnown RBP16.2■□□□□ 0.18
PDGFB-201ENST00000331163 IGSF8Q969P0 613 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 PCDH9Q9HC56 1237 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 SZT2Q5T011 3432 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 SCN5AQ14524 2016 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 SNAP91O60641 907 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 TMEM63AO94886 807 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 NQO1P15559 274 aaKnown RBP16.2■□□□□ 0.18
PDGFB-201ENST00000331163 PHBP35232 272 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 BMPR1AP36894 532 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 FNBP1LQ5T0N5 605 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 TMEM175Q9BSA9 504 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 MTRRQ9UBK8 725 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 WNT6Q9Y6F9 365 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 ZDBF2Q9HCK1 2354 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 EFCAB14O75071 495 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 DNAJC8O75937 253 aaPredicted RBP16.2■□□□□ 0.18
PDGFB-201ENST00000331163 PPM1FP49593 454 aaPredicted RBP16.2■□□□□ 0.18
PDGFB-201ENST00000331163 CMTM8Q8IZV2 173 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 BBS5Q8N3I7 341 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 TDRD5Q8NAT2 981 aaKnown RBP16.2■□□□□ 0.18
PDGFB-201ENST00000331163 GANCQ8TET4 914 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 ZYG11BQ9C0D3 744 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 C12orf65Q9H3J6 166 aaKnown RBP16.2■□□□□ 0.18
PDGFB-201ENST00000331163 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.2■□□□□ 0.18
PDGFB-201ENST00000331163 NKIRAS1Q9NYS0 192 aa16.2■□□□□ 0.18
PDGFB-201ENST00000331163 FAM47DPA6NHR8 397 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 I6L893 689 aaPredicted RBP16.19■□□□□ 0.18
PDGFB-201ENST00000331163 CYBBP04839 570 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 GLDCP23378 1020 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 IL4RP24394 825 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 CSE1LP55060 971 aaKnown RBP16.19■□□□□ 0.18
PDGFB-201ENST00000331163 SIX1Q15475 284 aaPredicted RBP16.19■□□□□ 0.18
PDGFB-201ENST00000331163 DPYSL2Q16555 572 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 ZNF449Q6P9G9 518 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 PCGF5Q86SE9 256 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 GRIN3AQ8TCU5 1115 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 CCHCR1Q8TD31 782 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 TACR2P21452 398 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 OXCT1P55809 520 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 PABPC1LQ4VXU2 614 aaKnown RBP16.19■□□□□ 0.18
PDGFB-201ENST00000331163 CERCAMQ5T4B2 595 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 VSIG1Q86XK7 387 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 NIPA2Q8N8Q9 360 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 SKA2Q8WVK7 121 aaPredicted RBP16.19■□□□□ 0.18
PDGFB-201ENST00000331163 CPT1BQ92523 772 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 ZNF570Q96NI8 536 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 BBS2Q9BXC9 721 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 VPS11Q9H270 941 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 TNKS2Q9H2K2 1166 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms