RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GLULP15104 373 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 HNRNPFP52597 415 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 OGDHQ02218 1023 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 SLC13A2Q13183 592 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 FAM214AQ32MH5 1076 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 FAXCQ5TGI0 409 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 BTBD8Q5XKL5 378 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 TTC33Q6PID6 262 aaPredicted RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 MAMDC4Q6UXC1 1216 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 TAS2R42Q7RTR8 314 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ABHD11Q8NFV4 315 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 PPP1R14CQ8TAE6 165 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 HM13Q8TCT9 377 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 CALML6Q8TD86 181 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ZFP90Q8TF47 636 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 NAP1L4Q99733 375 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 OLFM1Q99784 485 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 SGIP1Q9BQI5 828 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 RTKNQ9BST9 563 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 CCDC68Q9H2F9 335 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 PCDH9Q9HC56 1237 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ATP11BQ9Y2G3 1177 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 MRPL11Q9Y3B7 192 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 FAM149AA5PLN7 773 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 CCRL2O00421 344 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 TMCC2O75069 709 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 TIPRLO75663 272 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 P4HBP07237 508 aaKnown RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 ADORA2AP29274 412 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 HSPA13P48723 471 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 RAD23AP54725 363 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 RALGDSQ12967 914 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ZBTB17Q13105 803 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SMTNL2Q2TAL5 461 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 TTC39BQ5VTQ0 682 aaPredicted RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 ARHGEF16Q5VV41 709 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SPOCD1Q6ZMY3 1216 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 MAMSTRQ6ZN01 415 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 PRR23CQ6ZRP0 262 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ZNF781Q8N8C0 355 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 FAM71DQ8N9W8 422 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SPERTQ8NA61 448 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ZNF280CQ8ND82 737 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 OR2T3Q8NH03 318 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SUN5Q8TC36 379 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 TFAP2CQ92754 450 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 LENG9Q96B70 501 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SH3YL1Q96HL8 342 aaPredicted RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 TAAR1Q96RJ0 339 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 NPAS2Q99743 824 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ALOXE3Q9BYJ1 711 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 WDR11Q9BZH6 1224 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 MIR1-1HGQ9H1L0 117 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 COG4Q9H9E3 785 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 PPCSQ9HAB8 311 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 WDR6Q9NNW5 1121 aaKnown RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 RNF146Q9NTX7 359 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 PARVAQ9NVD7 372 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 UGT2A1Q9Y4X1 527 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 TEX264Q9Y6I9 313 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 A0A087WXM4 84 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 MSH4O15457 936 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 FAM189A1O60320 539 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SNAP91O60641 907 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 CLPXO76031 633 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 RPS12P25398 132 aaKnown RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 MAP4P27816 1152 aaKnown RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 GRIA1P42261 906 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 MAMLD1Q13495 774 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 BAATQ14032 418 aaPredicted RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 ANO4Q32M45 955 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 PLA2G4FQ68DD2 849 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 BNC2Q6ZN30 1099 aaPredicted RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 C1orf186Q6ZWK4 172 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 CHSY3Q70JA7 882 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 KIAA2013Q8IYS2 634 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 CATSPER1Q8NEC5 780 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 VPS37AQ8NEZ2 397 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ACTL9Q8TC94 416 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 TMA16Q96EY4 203 aaKnown RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 AP4E1Q9UPM8 1137 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 EXOC7Q9UPT5 735 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SORCS3Q9UPU3 1222 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 CEP350Q5VT06 3117 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ZNF701M0R085 212 aaPredicted RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 KMOO15229 486 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 BCAS2O75934 225 aaPredicted RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 CRYZL1O95825 349 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 FYNP06241 537 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SPNP16150 400 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 MX2P20592 715 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ENPP1P22413 925 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 PIK3R1P27986 724 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ZNF135P52742 658 aaPredicted RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 MCCD1P59942 119 aaPredicted RBP8.93□□□□□ -0.98
VAPB-201ENST00000265619 PCLAFQ15004 111 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 NDUFA5Q16718 116 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 KCNT1Q5JUK3 1230 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 TREML2Q5T2D2 321 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SLC26A11Q86WA9 606 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms