RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 CCDC106Q9BWC9 280 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 TJP2Q9UDY2 1190 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 PSMD13Q9UNM6 376 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 COL5A3P25940 1745 aaPredicted RBP11.73□□□□□ -0.53
CCND1-201ENST00000227507 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.73□□□□□ -0.53
CCND1-201ENST00000227507 TMEM247A6NEH6 219 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 CAPN14A8MX76 684 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 VILLO15195 856 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 CD52P31358 61 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 ARHGAP1Q07960 439 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 WASHC5Q12768 1159 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 NME3Q13232 169 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 DUS1LQ6P1R4 473 aaKnown RBP11.73□□□□□ -0.53
CCND1-201ENST00000227507 UTS2BQ765I0 119 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 TTC30BQ8N4P2 665 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 SMYD1Q8NB12 490 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 HASPINQ8TF76 798 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 ACO2Q99798 780 aaKnown RBP11.73□□□□□ -0.53
CCND1-201ENST00000227507 ARMC7Q9H6L4 198 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 LY75O60449 1722 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 TMEM221A6NGB7 291 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 AKAP10O43572 662 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 OCM2P0CE71 109 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 OCMP0CE72 109 aaPredicted RBP11.73□□□□□ -0.53
CCND1-201ENST00000227507 VDRP11473 427 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 PDGFRAP16234 1089 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 TFE3P19532 575 aaPredicted RBP11.73□□□□□ -0.53
CCND1-201ENST00000227507 EPHA3P29320 983 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 LHX1P48742 406 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 GOLGA7BQ2TAP0 167 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 C6orf183Q5T699 404 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 GPR141Q7Z602 305 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 ACOT1Q86TX2 421 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 PCDH20Q8N6Y1 951 aaKnown RBP11.73□□□□□ -0.53
CCND1-201ENST00000227507 KYQ8NBH2 561 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 OR5B17Q8NGF7 314 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 ZNF516Q92618 1163 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 AZIN2Q96A70 460 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 PRICKLE1Q96MT3 831 aaPredicted RBP11.73□□□□□ -0.53
CCND1-201ENST00000227507 AGAP3Q96P47 875 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 HIPK3Q9H422 1215 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 ZNF358Q9NW07 568 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 RNF186Q9NXI6 227 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 TMEM98Q9Y2Y6 226 aa11.73□□□□□ -0.53
CCND1-201ENST00000227507 SPAG6O75602 509 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 MOCS2O96007 188 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 MIPP30301 263 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 SLC5A3P53794 718 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 PTP4A2Q12974 167 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 SNX17Q15036 470 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 NFE2Q16621 373 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 CTXN3Q4LDR2 81 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 DDHD1Q8NEL9 900 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 UBA3Q8TBC4 463 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 CISHQ9NSE2 258 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 DNAJB4Q9UDY4 337 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 Q9Y3F1 56 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 TPP1O14773 563 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 DNAJA2O60884 412 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 DARSP14868 501 aaKnown RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 ITGAXP20702 1163 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 GLRBP48167 497 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 EIF2B2P49770 351 aaKnown RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 PPM1LQ5SGD2 360 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 JADE1Q6IE81 842 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 UGT2A3Q6UWM9 527 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 CATSPER1Q8NEC5 780 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 SLC35B2Q8TB61 432 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 BSNDQ8WZ55 320 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 APOBEC3GQ9HC16 384 aaKnown RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 TIMMDC1Q9NPL8 285 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 PAK5Q9P286 719 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 MT-CO1P00395 513 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 MMP8P22894 467 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 IL1R2P27930 398 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 ZBTB41Q5SVQ8 909 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 LRRC8EQ6NSJ5 796 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 TTC33Q6PID6 262 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 KYAT3Q6YP21 454 aaKnown RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 RYBPQ8N488 228 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 DNAAF3Q8N9W5 541 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 CASP10Q92851 521 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 RCN3Q96D15 328 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 TCF7L2Q9NQB0 619 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 SLC8A2Q9UPR5 921 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 A0A1B0GTW7 788 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 SAC3D1A6NKF1 404 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 ARIH2O95376 493 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 SERPINE1P05121 402 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 ARF4P18085 180 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 XRCC1P18887 633 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 XPAP23025 273 aaPredicted RBP11.72□□□□□ -0.53
CCND1-201ENST00000227507 RAP1GAPP47736 663 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 VEGFBP49765 207 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 EEF1DP3Q658K8 133 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 FAAH2Q6GMR7 532 aa11.72□□□□□ -0.53
CCND1-201ENST00000227507 CYGBQ8WWM9 190 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms