RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 UBE2Q2Q8WVN8 375 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 TMEM204Q9BSN7 226 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 BRD8Q9H0E9 1235 aa4.83□□□□□ -1.64
BRCA1-229ENST00000621897 PABPC3Q9H361 631 aaKnown RBP4.83□□□□□ -1.64
BRCA1-229ENST00000621897 ELAC1Q9H777 363 aaKnown RBP4.83□□□□□ -1.64
BRCA1-229ENST00000621897 GAGE12JA6NER3 117 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 NPIPB13A6NJU9 1138 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 NPIPB5A8MRT5 1133 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 NPIPB4C9JG80 1138 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 PLIN1O60240 522 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 CBSLP0DN79 551 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 KLRC2P26717 231 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 TNFRSF8P28908 595 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 TNFSF8P32971 234 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 CBSP35520 551 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 SLC16A2P36021 539 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 RFX5P48382 616 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-229ENST00000621897 CDK7P50613 346 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 AP2B1P63010 937 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 ZXDBP98169 803 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 CDK18Q07002 472 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 SULT6B1Q6IMI4 303 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 MTFR2Q6P444 385 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 AAGABQ6PD74 315 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 Q6ZTK2 550 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 TRILQ7L0X0 811 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 RAB11FIP2Q7L804 512 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 ENDOVQ8N8Q3 282 aaKnown RBP4.82□□□□□ -1.64
BRCA1-229ENST00000621897 SLC2A12Q8TD20 617 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 WDR77Q9BQA1 342 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-229ENST00000621897 POLR3GLQ9BT43 218 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 SF3B5Q9BWJ5 86 aaKnown RBP4.82□□□□□ -1.64
BRCA1-229ENST00000621897 POLDIP3Q9BY77 421 aaKnown RBP4.82□□□□□ -1.64
BRCA1-229ENST00000621897 ZNF700Q9H0M5 742 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 ABHD16BQ9H3Z7 469 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 PLAC1Q9HBJ0 212 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 Q9N2J8 555 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 SLC22A11Q9NSA0 550 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 RNF146Q9NTX7 359 aa4.82□□□□□ -1.64
BRCA1-229ENST00000621897 HERC5Q9UII4 1024 aaKnown RBP4.82□□□□□ -1.64
BRCA1-229ENST00000621897 C19orf53Q9UNZ5 99 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-229ENST00000621897 C4orf47A7E2U8 309 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 EFCAB8A8MWE9 144 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 INAFM1C9JVW0 142 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 LCATP04180 440 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 TYK2P29597 1187 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 HTR3AP46098 478 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 RASSF2P50749 326 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 SELENOVP59797 346 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 PKP1Q13835 747 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 RPS6KA2Q15349 733 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 KLHL17Q6TDP4 642 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 RRAGAQ7L523 313 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 FAM217AQ8IXS0 508 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 VPS52Q8N1B4 723 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 RBMXL3Q8N7X1 1067 aaKnown RBP4.81□□□□□ -1.64
BRCA1-229ENST00000621897 PRR26Q8N8Z3 221 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 LRRC57Q8N9N7 239 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 STT3BQ8TCJ2 826 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 NEUROG1Q92886 237 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 SLC39A13Q96H72 371 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 RMDN3Q96TC7 470 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 PCGF6Q9BYE7 350 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 B3GNT4Q9C0J1 378 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 KRCC1Q9NPI7 259 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-229ENST00000621897 TMEM248Q9NWD8 314 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 LRFN1Q9P244 771 aa4.81□□□□□ -1.64
BRCA1-229ENST00000621897 CNTNAP2Q9UHC6 1331 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 A0A1B0GVT2 93 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 FAM90A20PA6NIJ5 464 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 I6L893 689 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-229ENST00000621897 RGS14O43566 566 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 PKMP14618 531 aaKnown RBP4.8□□□□□ -1.64
BRCA1-229ENST00000621897 CPA1P15085 419 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 HOXB9P17482 250 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-229ENST00000621897 SERPINA4P29622 427 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 PCP4P48539 62 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 TMPRSS3P57727 454 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 GPR162Q16538 588 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 TBRG1Q3YBR2 411 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 PLK5Q496M5 336 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 LRRC24Q50LG9 513 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 SYNE3Q6ZMZ3 975 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 GABPB2Q8TAK5 448 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-229ENST00000621897 C2CD4CQ8TF44 421 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 KCNJ9Q92806 393 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 ARRDC3Q96B67 414 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 C3orf49Q96BT1 292 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 CTAGE1Q96RT6 745 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 NTPCRQ9BSD7 190 aaKnown RBP4.8□□□□□ -1.64
BRCA1-229ENST00000621897 HIPK3Q9H422 1215 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 ACTR5Q9H9F9 607 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-229ENST00000621897 DACT1Q9NYF0 836 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 NCKIPSDQ9NZQ3 722 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 SLC25A13Q9UJS0 675 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 PTGDR2Q9Y5Y4 395 aa4.8□□□□□ -1.64
BRCA1-229ENST00000621897 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 CYP1A2P05177 515 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 ARSBP15848 533 aa4.79□□□□□ -1.64
BRCA1-229ENST00000621897 CHRNB2P17787 502 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms