RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ADAT2Q7Z6V5 191 aaKnown RBP15.06■□□□□ 0
CD48-203ENST00000613788 KIAA0907Q7Z7F0 614 aaPredicted RBP15.06■□□□□ 0
CD48-203ENST00000613788 ZNF354CQ86Y25 554 aa15.06■□□□□ 0
CD48-203ENST00000613788 ARHGAP12Q8IWW6 846 aa15.06■□□□□ 0
CD48-203ENST00000613788 AHI1Q8N157 1196 aa15.06■□□□□ 0
CD48-203ENST00000613788 OR52K2Q8NGK3 314 aa15.06■□□□□ 0
CD48-203ENST00000613788 LMLNQ96KR4 655 aa15.06■□□□□ 0
CD48-203ENST00000613788 CAPZA3Q96KX2 299 aa15.06■□□□□ 0
CD48-203ENST00000613788 P2RY13Q9BPV8 354 aa15.06■□□□□ 0
CD48-203ENST00000613788 SPON2Q9BUD6 331 aa15.06■□□□□ 0
CD48-203ENST00000613788 FRMD8P1Q9BZ68 369 aaPredicted RBP15.06■□□□□ 0
CD48-203ENST00000613788 BRD8Q9H0E9 1235 aa15.06■□□□□ 0
CD48-203ENST00000613788 ATP13A1Q9HD20 1204 aa15.06■□□□□ 0
CD48-203ENST00000613788 HOMER3Q9NSC5 361 aa15.06■□□□□ 0
CD48-203ENST00000613788 SAE1Q9UBE0 346 aaPredicted RBP15.06■□□□□ 0
CD48-203ENST00000613788 WNT16Q9UBV4 365 aa15.06■□□□□ 0
CD48-203ENST00000613788 CDC23Q9UJX2 597 aa15.06■□□□□ 0
CD48-203ENST00000613788 VPS28Q9UK41 221 aa15.06■□□□□ 0
CD48-203ENST00000613788 TCRBV7S2A1N4TA0A589 114 aa15.05■□□□□ -0
CD48-203ENST00000613788 PPP1R12AO14974 1030 aaPredicted RBP15.05■□□□□ -0
CD48-203ENST00000613788 TIMM44O43615 452 aa15.05■□□□□ -0
CD48-203ENST00000613788 SOX9P48436 509 aa15.05■□□□□ -0
CD48-203ENST00000613788 PAPOLAP51003 745 aaKnown RBP15.05■□□□□ -0
CD48-203ENST00000613788 GALK1P51570 392 aa15.05■□□□□ -0
CD48-203ENST00000613788 OTUD4Q01804 1114 aaKnown RBP15.05■□□□□ -0
CD48-203ENST00000613788 GALNT2Q10471 571 aa15.05■□□□□ -0
CD48-203ENST00000613788 XRCC4Q13426 336 aa15.05■□□□□ -0
CD48-203ENST00000613788 SERINC3Q13530 473 aa15.05■□□□□ -0
CD48-203ENST00000613788 PLEKHG6Q3KR16 790 aa15.05■□□□□ -0
CD48-203ENST00000613788 OR7D4Q8NG98 312 aa15.05■□□□□ -0
CD48-203ENST00000613788 ACTL9Q8TC94 416 aa15.05■□□□□ -0
CD48-203ENST00000613788 ACDQ96AP0 544 aa15.05■□□□□ -0
CD48-203ENST00000613788 HAUS1Q96CS2 278 aa15.05■□□□□ -0
CD48-203ENST00000613788 ALG14Q96F25 216 aa15.05■□□□□ -0
CD48-203ENST00000613788 HMCESQ96FZ2 354 aa15.05■□□□□ -0
CD48-203ENST00000613788 C2orf49Q9BVC5 232 aaPredicted RBP15.05■□□□□ -0
CD48-203ENST00000613788 ACE2Q9BYF1 805 aaPredicted RBP15.05■□□□□ -0
CD48-203ENST00000613788 OR51B4Q9Y5P0 310 aa15.05■□□□□ -0
CD48-203ENST00000613788 DOCK4Q8N1I0 1966 aa15.04■□□□□ -0
CD48-203ENST00000613788 MYO10Q9HD67 2058 aa15.04■□□□□ -0
CD48-203ENST00000613788 GOLGA6L10A0A0M3HER8 536 aa15.04■□□□□ -0
CD48-203ENST00000613788 TBC1D3BA6NDS4 549 aa15.04■□□□□ -0
CD48-203ENST00000613788 MAN2B1O00754 1011 aa15.04■□□□□ -0
CD48-203ENST00000613788 MCF2LO15068 1137 aa15.04■□□□□ -0
CD48-203ENST00000613788 TRIM24O15164 1050 aa15.04■□□□□ -0
CD48-203ENST00000613788 KDELR3O43731 214 aa15.04■□□□□ -0
CD48-203ENST00000613788 APODP05090 189 aa15.04■□□□□ -0
CD48-203ENST00000613788 PECAM1P16284 738 aaPredicted RBP15.04■□□□□ -0
CD48-203ENST00000613788 POLR2EP19388 210 aaKnown RBP15.04■□□□□ -0
CD48-203ENST00000613788 ACVRL1P37023 503 aa15.04■□□□□ -0
CD48-203ENST00000613788 GARSP41250 739 aaKnown RBP15.04■□□□□ -0
CD48-203ENST00000613788 GRIA2P42262 883 aa15.04■□□□□ -0
CD48-203ENST00000613788 PRKCQQ04759 706 aa15.04■□□□□ -0
CD48-203ENST00000613788 SULT2A1Q06520 285 aa15.04■□□□□ -0
CD48-203ENST00000613788 ZNF33AQ06730 810 aa15.04■□□□□ -0
CD48-203ENST00000613788 NOMO1Q15155 1222 aa15.04■□□□□ -0
CD48-203ENST00000613788 PITRM1Q5JRX3 1037 aa15.04■□□□□ -0
CD48-203ENST00000613788 APCDD1Q8J025 514 aa15.04■□□□□ -0
CD48-203ENST00000613788 ATPAF2Q8N5M1 289 aa15.04■□□□□ -0
CD48-203ENST00000613788 TERB1Q8NA31 727 aa15.04■□□□□ -0
CD48-203ENST00000613788 DCAF4L2Q8NA75 395 aa15.04■□□□□ -0
CD48-203ENST00000613788 CCNYQ8ND76 341 aa15.04■□□□□ -0
CD48-203ENST00000613788 CHFRQ96EP1 664 aa15.04■□□□□ -0
CD48-203ENST00000613788 IPO11Q9UI26 975 aaKnown RBP15.04■□□□□ -0
CD48-203ENST00000613788 FBXL21Q9UKT6 434 aa15.04■□□□□ -0
CD48-203ENST00000613788 A0A0A0MRY4 1105 aa15.03■□□□□ -0
CD48-203ENST00000613788 ZSCAN5CA6NGD5 496 aaPredicted RBP15.03■□□□□ -0
CD48-203ENST00000613788 HACD1B0YJ81 288 aa15.03■□□□□ -0
CD48-203ENST00000613788 CBX4O00257 560 aa15.03■□□□□ -0
CD48-203ENST00000613788 KRIT1O00522 736 aa15.03■□□□□ -0
CD48-203ENST00000613788 ZNF189O75820 626 aaPredicted RBP15.03■□□□□ -0
CD48-203ENST00000613788 KAT7O95251 611 aa15.03■□□□□ -0
CD48-203ENST00000613788 MAP3K6O95382 1288 aa15.03■□□□□ -0
CD48-203ENST00000613788 ATP5BP06576 529 aaKnown RBP15.03■□□□□ -0
CD48-203ENST00000613788 CCNCP24863 283 aa15.03■□□□□ -0
CD48-203ENST00000613788 EIF3EP60228 445 aaKnown RBP15.03■□□□□ -0
CD48-203ENST00000613788 KDSRQ06136 332 aa15.03■□□□□ -0
CD48-203ENST00000613788 EIF4HQ15056 248 aaKnown RBP15.03■□□□□ -0
CD48-203ENST00000613788 E2F5Q15329 346 aa15.03■□□□□ -0
CD48-203ENST00000613788 MLF2Q15773 248 aaPredicted RBP15.03■□□□□ -0
CD48-203ENST00000613788 CCNG2Q16589 344 aa15.03■□□□□ -0
CD48-203ENST00000613788 GEN1Q17RS7 908 aa15.03■□□□□ -0
CD48-203ENST00000613788 MBLAC2Q68D91 279 aa15.03■□□□□ -0
CD48-203ENST00000613788 TIGD7Q6NT04 549 aaPredicted RBP15.03■□□□□ -0
CD48-203ENST00000613788 RETSATQ6NUM9 610 aa15.03■□□□□ -0
CD48-203ENST00000613788 TP53INP2Q8IXH6 220 aa15.03■□□□□ -0
CD48-203ENST00000613788 PHTF2Q8N3S3 785 aa15.03■□□□□ -0
CD48-203ENST00000613788 NETO2Q8NC67 525 aa15.03■□□□□ -0
CD48-203ENST00000613788 TTC17Q96AE7 1141 aa15.03■□□□□ -0
CD48-203ENST00000613788 HDAC11Q96DB2 347 aa15.03■□□□□ -0
CD48-203ENST00000613788 SHDQ96IW2 340 aa15.03■□□□□ -0
CD48-203ENST00000613788 OLFM3Q96PB7 478 aa15.03■□□□□ -0
CD48-203ENST00000613788 TSGA13Q96PP4 275 aa15.03■□□□□ -0
CD48-203ENST00000613788 FERMT1Q9BQL6 677 aa15.03■□□□□ -0
CD48-203ENST00000613788 INTS6Q9UL03 887 aaKnown RBP15.03■□□□□ -0
CD48-203ENST00000613788 MYOFQ9NZM1 2061 aa15.03■□□□□ -0
CD48-203ENST00000613788 CXorf51AA0A1B0GTR3 108 aa15.02■□□□□ -0
CD48-203ENST00000613788 H7C0C1 242 aa15.02■□□□□ -0
CD48-203ENST00000613788 ASLP04424 464 aa15.02■□□□□ -0
CD48-203ENST00000613788 RBP3P10745 1247 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms