RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 RASA4BC9J798 803 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 KCNK3O14649 394 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 RASA4O43374 803 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 GLDCP23378 1020 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 PTPN7P35236 360 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 OXCT1P55809 520 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 COPS2P61201 443 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 DYNLT1P63172 113 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 GBE1Q04446 702 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 GRSF1Q12849 480 aaKnown RBP eCLIP20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 ZNF783Q6ZMS7 281 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 SUGP1Q8IWZ8 645 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 CCDC33Q8N5R6 958 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 SORCS1Q8WY21 1168 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 HMCESQ96FZ2 354 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 SHDQ96IW2 340 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 MAK16Q9BXY0 300 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 MUC3BQ9H195 1237 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 CHD5Q8TDI0 1954 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 TECTAO75443 2155 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 NUP205Q92621 2012 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 APOL1O14791 398 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 SNAP91O60641 907 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 CST8O60676 142 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 MAP3K6O95382 1288 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 CHRNB1P11230 501 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 ALADP13716 330 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 DRD1P21728 446 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 MSNP26038 577 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 CTSOP43234 321 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 NDST2P52849 883 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 YBEYP58557 167 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 SLC10A2Q12908 348 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 FZD5Q13467 585 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 SLC12A1Q13621 1099 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 UBXN2BQ14CS0 331 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 POLD3Q15054 466 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 EMC10Q5UCC4 262 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 NPNTQ6UXI9 565 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 NYAP1Q6ZVC0 841 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 CYB5D2Q8WUJ1 264 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 EXOC4Q96A65 974 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 TTC17Q96AE7 1141 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 SPON2Q9BUD6 331 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 ACE2Q9BYF1 805 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 MAGEH1Q9H213 219 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 ZDHHC4Q9NPG8 344 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 VPS28Q9UK41 221 aa20.5■□□□□ 0.87
SHKBP1-222ENST00000600320 BDP1A6H8Y1 2624 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 ZMPSTE24O75844 475 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 CXCR5P32302 372 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 SEC13P55735 322 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 CCINQ13939 588 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 DMC1Q14565 340 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 PREPLQ4J6C6 727 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 CWF19L1Q69YN2 538 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 ARHGAP36Q6ZRI8 547 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 BBS12Q6ZW61 710 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 LZTR1Q8N653 840 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 DCAF4L2Q8NA75 395 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 CIPCQ9C0C6 399 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 CARD9Q9H257 536 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 ATP13A1Q9HD20 1204 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 ELOVL2Q9NXB9 296 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 DONSONQ9NYP3 566 aa20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 MRPS17Q9Y2R5 130 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-222ENST00000600320 NYNRINQ9P2P1 1898 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 TCRBV7S2A1N4TA0A589 114 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 TMEM221A6NGB7 291 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 FAM170BA6NMN3 283 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 M0R296 226 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 DFFAO00273 331 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 PECAM1P16284 738 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 TNFRSF4P43489 277 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 KIR2DL1P43626 348 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 PAPOLAP51003 745 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 ETF1P62495 437 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 ARF5P84085 180 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 TFDP2Q14188 446 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 PARP15Q460N3 678 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 SEL1L2Q5TEA6 688 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 EGFLAMQ63HQ2 1017 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 IL31Q6EBC2 164 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 EPHX3Q9H6B9 360 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 DTLQ9NZJ0 730 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 SAE1Q9UBE0 346 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 VPS51Q9UID3 782 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 EFR3BQ9Y2G0 817 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 ACTL7AQ9Y615 435 aa20.48■□□□□ 0.87
SHKBP1-222ENST00000600320 ZFXP17010 805 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 POLR2EP19388 210 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 SERPINB6P35237 376 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 CETN2P41208 172 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 GALNT2Q10471 571 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 SERINC3Q13530 473 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 EIF4HQ15056 248 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 PTPRNQ16849 979 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 SYT10Q6XYQ8 523 aa20.47■□□□□ 0.87
SHKBP1-222ENST00000600320 ZSCAN30Q86W11 494 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms